Gene Pars_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2116 
Symbol 
ID5055738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1891913 
End bp1892323 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content60% 
IMG OID640469668 
ProductNUDIX hydrolase 
Protein accessionYP_001154314 
Protein GI145592312 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGGC CCAAGGTCGC CGTGGCCGCC GTTGCCATCA AGGACGGGAG GGTCGTACTA 
GTCAAGAGGA AGTATCCCCC CAGCGCCGGG AAGTGGAGCC TCCCCGGTGG GCACGTGGAG
CTCGGAGAAA GGCTAGAAGA CGCCGTGTTG AGAGAATTGA AAGAAGAGAC CGGTCTAACG
GGGAGGGTCG TGGGTTTTCT CCGGCCTGTG GAGTACATCG AGGCAGAGGG GGGAGAGGTG
AAGTACCACT TCGTCATCCT AGTCTACAAG GTGGATATCG TGGGCGATGC GGAGCCGAGG
GCCGGGGACG ACGCCGAGGA GGCTGTGGCG GTGCCTCTAG AAAAAGCGCT AGGGATGGAC
TTGACAAAAA CGACAAGGGA GGTTTTGGCG GGGCTACTGC CTCAGCTTTG A
 
Protein sequence
MSGPKVAVAA VAIKDGRVVL VKRKYPPSAG KWSLPGGHVE LGERLEDAVL RELKEETGLT 
GRVVGFLRPV EYIEAEGGEV KYHFVILVYK VDIVGDAEPR AGDDAEEAVA VPLEKALGMD
LTKTTREVLA GLLPQL