Gene Pars_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2098 
Symbol 
ID5054219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1874138 
End bp1874536 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content62% 
IMG OID640469648 
Productthioesterase superfamily protein 
Protein accessionYP_001154296 
Protein GI145592294 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.19882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGC CCTTCGAGGC GAGATACAGG GTCTACTGGC ACCACACAGA CGGTGCGGGC 
ATCGCACACT TTTCCCGCAT ATTGGCAATC GTCGAACAGG CTGAGGAGGA TTTCTACGCC
TCTAAGGGCC TGCTCCACGT CCACGGCCGG TTGCCGAGGA GGGAGGTGTA CGCCTCTTTC
CTCCACCCCC TTAGGCGGGG GGACGAGGTG CTGGTGAGGA TCTGGGCAGG CGAGGTGAGG
AGGAGGGCGG TGAGGTACCG CTTCGAGATA TTGAATCTGA CGGCGGGCAG AAAGGCGGCT
GAGGGCCACG TCGTGGCTGT CTGCGTAGAC AGCGAGGGTG GAGAGCTAAA GGCGGTGGAG
TGCCCCCAGG AGTTTGTGGA AGCTTGGAAG GAGGCCTAG
 
Protein sequence
MAMPFEARYR VYWHHTDGAG IAHFSRILAI VEQAEEDFYA SKGLLHVHGR LPRREVYASF 
LHPLRRGDEV LVRIWAGEVR RRAVRYRFEI LNLTAGRKAA EGHVVAVCVD SEGGELKAVE
CPQEFVEAWK EA