Gene Pars_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2093 
Symbol 
ID5055513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1870143 
End bp1871357 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content59% 
IMG OID640469643 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_001154291 
Protein GI145592289 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.325531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAA TCAACGGCGG GAAGCCCGTT AGGGAAACGC CAATTGTGGC GAGGCCCGCG 
GTGTACAGCG AGGAGGTCCT CCAAGCCATT GCGGATGTCC TAAAATCCGG CATTCTCACC
GCGCAGCACG GCAAGTGGGT GAAGGCGTTT GAAAACGAGC TTGCCTCATA CCTCGGCGTG
CGGCACGCCA TGGCTGTGGC CAACGGCACA GTGGCGCTCC ACACAGCTCT CAAGGCCCTG
GGCGTGGGGC CTGGCGATGA GGTCGTCACG ACGCCGTTTA CCTTCGCCGC ATCCGCCACG
GCGGTTTTAC ACGCAAACGC GGTGCCGGTC TTCGCTGATA TTGACAGGGA GACCCTCAAC
CTAGACCCCG CCTCGGTGGA GGAGGCGATT ACGGACAGAA CAAAGGCCAT CGTCGTCGTC
CACTTGGCGG GCATGCCGGC GGAGATGGAC CAGTTCCTCA AGCTGGCCGA TAGGTACGGA
GTTAAGATAG TGGAGGACAC GGCGCAAGCC CTTGGTGCCG AGTACAGGGG GCGGAGGGTG
GGGTCGATAG GGCACGTGTC CACCTTCAGC TTCTACGCTA CGAAGCACAT TACCTCCGGC
GAGGGAGGCG CCGTGGCGAC AGACGTGGCG GCCTACGCAG AGAGGGCGAA GCTGATCAGA
GCCCACGGCG AGGTGGGGAA GTACAGCTAC GAGTTGCTCG GCTACAACTA CCGCATGACT
GAGATACAGG GCGTCCTCGC GTACTACCAG CTAAAGCAAC TCCCCGAGAT GCAGAAGAGG
CGGGATGCCT ACGTCAAGGT GCTCCTAGAG GAGCTGTTGC CTCTAGAAGG AGACTTAATC
ACAGTGCCGA GACCGAAGCC GTATGTAAAG CACTCATGGC ACTTGGTGCA GATCCTTCTT
GCCATTGAGA AGTTGACAAA GCCCCGGGAC TTCGTAGTGG AGGCGCTTAG AGCTGAGGGT
ATCGGCAACG TCTTCGTGGC CTACCCAACG CCGCTCTACA AGACGCCGCT GTTCCAAAAA
CGGGAGGGAC ACGGGCTTGG TTGCCCCTGG ACTTGCCCCT ATTACAAGCG CAAGGTAGAG
TACAAGCCGT TGCCAAACGC CGAGTGGGCC GCCGAGAGGG TAGTATCGTT GCTGGTTATG
CCAAACCTCA CAGAGCAAGA CGCAATTGAC ACGGCTAAGG CCATTAAAAA AGTGCTTAGC
GAGGTCAAGC GTTAG
 
Protein sequence
MLAINGGKPV RETPIVARPA VYSEEVLQAI ADVLKSGILT AQHGKWVKAF ENELASYLGV 
RHAMAVANGT VALHTALKAL GVGPGDEVVT TPFTFAASAT AVLHANAVPV FADIDRETLN
LDPASVEEAI TDRTKAIVVV HLAGMPAEMD QFLKLADRYG VKIVEDTAQA LGAEYRGRRV
GSIGHVSTFS FYATKHITSG EGGAVATDVA AYAERAKLIR AHGEVGKYSY ELLGYNYRMT
EIQGVLAYYQ LKQLPEMQKR RDAYVKVLLE ELLPLEGDLI TVPRPKPYVK HSWHLVQILL
AIEKLTKPRD FVVEALRAEG IGNVFVAYPT PLYKTPLFQK REGHGLGCPW TCPYYKRKVE
YKPLPNAEWA AERVVSLLVM PNLTEQDAID TAKAIKKVLS EVKR