Gene Pars_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2085 
Symbol 
ID5056119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1862479 
End bp1862853 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content58% 
IMG OID640469634 
Producthypothetical protein 
Protein accessionYP_001154283 
Protein GI145592281 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.141987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATCC CCAGGGAATT TCTCGAAGAG GCAAGGCGCA GGTGCACCCC ACAAGAGGAG 
TGCGTAGCCC TCCTCTTCGG CAGAGACAAT GCCGTGGCTA AGTGGCGGTG GGTGCGCAAC
TTGGCGGGGA GCCCCGTCGC GTTTAGAATA GACCCCGAGG AGATGTATAG GGCGATTACC
GAGGCGGAGG AGGAGGGGCT GGAGCTACTC GCCATCTTCC ACACACACCC CGGGCCCCCG
ACCCCCAGTA GCGTAGATCT GAAGTACATG AGGCTGTGGC CAGTTGTGTG GATCATATCA
AGCACGTTTT CGTGGAAGAC GACGGCTTGG CGCCTTGAGA AAACATTAAG GGAGGTACAA
ATCACGTTGC AATGA
 
Protein sequence
MRIPREFLEE ARRRCTPQEE CVALLFGRDN AVAKWRWVRN LAGSPVAFRI DPEEMYRAIT 
EAEEEGLELL AIFHTHPGPP TPSSVDLKYM RLWPVVWIIS STFSWKTTAW RLEKTLREVQ
ITLQ