| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2058 |
|---|
| Symbol | |
|---|
| ID | 5054993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1839414 |
|---|
| End bp | 1840337 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640469607 |
|---|
| Product | ornithine carbamoyltransferase |
|---|
| Protein accession | YP_001154256 |
|---|
| Protein GI | 145592254 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0078] Ornithine carbamoyltransferase |
|---|
| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.638653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.14695 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACACT TGCTTACGTT ATTAGAGTTT GCCCCCCACG AGGTTGAGGA TCTTCTGCGC
ATATCAAGAG ATTTCAAGAC GAGGTTCTTA GCCGGCGAGG TATACACCCC TCTCTTCCTG
GGTAGAGTCC TTCTTCTATA TTTCGAGAAA CACAGCACAA GAACGAGGCT TTCCCTCACC
GCCGCGGCCG CCCAGTTGGG CATGCAGGCC GTGTACACCA CGCCAAACGA GCTCCAGCTC
GCCAGGGGAG AGACTGTCGC AGACACTATG AGAGTCGTGT CTAGATACGC CGCGGCTGTG
GCGGCTAGGG TGTACAAGCA CGAGACGCTG GATGAAATGG CCAGGCACAG CTCAATACCT
GTAATCAACG CCTTGTCCGA CAGACACCAC CCGCTCCAAG CACTGGCCGA CGCGCTGACG
CTGTGGGAGA GGTCGGGGAG GCTTCACAAC TTGAAGGTGG CGTTTGTTGG CGATGTATCG
AACAACGTGG CTACTAGCCT CGCAGTAATC GGCGCCAAGC TGGGCTGGGA GGTGCGCCTC
GTCGGGCCGA AGCAGTTGTG GAACCAGAAA CTCGTCGACG AGCTGGCCGA GGACCTCGCC
AAGACTGGGG CGAGGATATA CTTCACAGAC TCGATAAACG ATGTGGCTGG AGTAGACGGC
GTATACACCG ACGTTTGGGT CTCCATGGGA TTTGAAAAGG AGGCCGAGGA GCGGAGAAGG
ATTCTAAAGC CCTACCAAGT CAACAGCCGC GTCATGGACA TCGCCGGGAA GAAGGCGGTG
TTCCTCCACT GCCTCCCAGC ACACCGCGGC GAGGAGGTCA CCGACGACGT GATAGACGGC
CCCCAGTCAG CCGTTTGGGA CCAGGCGGAG AACAGGATGC ACACTGCGAA GGCGGTCCTG
GCGTATTTAC TAAAAACGCG CTGA
|
|---|
| Protein sequence | MRHLLTLLEF APHEVEDLLR ISRDFKTRFL AGEVYTPLFL GRVLLLYFEK HSTRTRLSLT
AAAAQLGMQA VYTTPNELQL ARGETVADTM RVVSRYAAAV AARVYKHETL DEMARHSSIP
VINALSDRHH PLQALADALT LWERSGRLHN LKVAFVGDVS NNVATSLAVI GAKLGWEVRL
VGPKQLWNQK LVDELAEDLA KTGARIYFTD SINDVAGVDG VYTDVWVSMG FEKEAEERRR
ILKPYQVNSR VMDIAGKKAV FLHCLPAHRG EEVTDDVIDG PQSAVWDQAE NRMHTAKAVL
AYLLKTR
|
|---|
| |