Gene Pars_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2048 
Symbol 
ID5054819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1831181 
End bp1831429 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content43% 
IMG OID640469597 
Product50S ribosomal protein L23P 
Protein accessionYP_001154246 
Protein GI145592244 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID[TIGR03636] archaeal ribosomal protein L23 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.700766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTAA GAAGAATTCT CATAACAGAA AAAACCCTCC GCCTCGCCGA GAAAGAAAAC 
AAAATAACAA TAATAGTAGA CAGGACAGCC ACAAAGAAGC AGATAGCCGA CGAAGTAGCC
AGACTATACA ACGTCAAAGT AGACAAAGTA AATACCGTAA TAACCCCACA AGGCGAGAAA
AAAGCCTACG TCAAGCTAGC AGAGGGCTAC AACGCAATGG ACCTACTAAG CAGGCTGGGA
GTTTTATAA
 
Protein sequence
MIVRRILITE KTLRLAEKEN KITIIVDRTA TKKQIADEVA RLYNVKVDKV NTVITPQGEK 
KAYVKLAEGY NAMDLLSRLG VL