Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_2044 |
Symbol | |
ID | 5056302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1826728 |
End bp | 1828785 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640469593 |
Product | Alpha-glucosidase |
Protein accession | YP_001154242 |
Protein GI | 145592240 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCCTAG AGCTTGGGAG GAAGAGCGTT AAGCTCGCGT TGGGGAGGCA GATCCTCTCC TTCCCCCTCC CAGGTGGCGA GCCCAGGCCG GCCGCCGAGT TTGACGGCAA GTCGCTGAGG GCCACTTGTT GCGGCGTAGG TGTGGAGCTG TTAGTGGAGA GGCGGGGCGG CGCGACTGTT GTTAGGAAGA GACTGGGGGC GAGGGAGCAC GTCTTCGGTC TCGGGACTAG GGCCTACCCG CCGGATAGGA GGAGGGGACG CTTCATCCTC TTCAATAACG ACTTGTACGG ATACCAGCTG GGGATGGACC CCCTATACGC CTCGATCCCC TTTATGGTGT TTGTAGAGGA CGGGAGGGCC TTCGGCCTCG TGGTTAACAG CCCGGCTTAC GGCGTCGTCG ACGTGGGGTT TTCGAAATAC AGCGAGGCGG TCGTGGAGGT GGAGGATCTC CCGGAGCTGT ATATACTCTT CGGCGAGGGG CCGCTGGATG TATATACCAC CTACAGCGAG GTTACGGGGA GGCCCTTCCT CCCGCCGTCG TGGGCCCTGG GCCTGCACCT ATCGCGCTAC AGCTACGAGC CCCAGGACGC GGCGGCCGAG GTGGTGCGGG AGGTCGCACG GGAGGTGCCC CTTGACGCGG TGTATCTCGA CATAGACTAC ATGGAGGGGT ACAAGCAGTT CACGTGGGAT TTGAAGAAGT TCCCAGACCC CGCCGGGTTT GTCCACGAGA TACGCGAGCT GGGCGTCAGG GTGGTGGCGA TTGTAGACCC CTACATAAAG GCGGAGCCGG GGTACAGGCC GTTCCGCGAG TTGCTTGACT GCCTCCTCGT GACGGAGAAC GACGAGCTCT TCCTCGCCAG GGGGTGGCCG GGGCTCTCCG CCCTGCCGGA CTTCCTAAAC CCCAAGTGCA GGGAGAGGTG GGGCGACTTA ATAGCCGACT TTGTAAAGAC GTACGGCATA GACGGCATCT GGCTTGACAT GAACGAGCCG ACTGTTTTCA ACTGCGACGC CCTAGCTACT AGGTCTAGGA TATACGCCCT GGTCGGTGCC ACGCCGCACG GCCTAACAAA AGAGGAGCTT TTATGCAAGG CGCCGAGAGG CGCCTACCAT GTAGTGGAGG GGGAGAAAAT CACCCACGAG AGAGTCCGGG GGCTTTACCC CTACTTCGAG GCGGAGGCCA CCTACCGCGG CCTCCTCAAG GCGGGAAGGG AGCCCTTTAT CCTCTCCCGG TCCGGCTACC TCGGCATACA GAAATACGCG GCGTTGTGGA CTGGGGACGT CCCCTCCACC TGGGAGGGCT TGAGGCTGAC CCTCATGACG GTGCTTGGCC TCTCGGCCTC CGGCGTGCCC TTCGTGGGCG CGGATGTGGG CGGCTTCGCC GGGCTGGGTG ACTACGAGCT AATCGCCAGG TGGTACCAAG CGGCGGCCTT CTTCCCCATC TACCGCGTCC ACAGAGACAA GGGCACCACA GACGCGGAGC CCACGAGGCT ACCGGCGCGG TACCGACACA TGGCGCTGGA GGCTATTAAG ACGAGGCTTA GGTTTCTGCC CTATCTAAGA CACCTGGCAT GGGCCGCCCA CCTACACGGC TACCCCATCG TGAGGCCGCT GGGCCTTGAG TTCCCCGACG ACGAAGACGC CTTTAAGATA CATGACGAGT ACATGGTGGG GCCTTTCCTC CTCTTCGCCC CTATTGTGGA CAAGGGAGCC AAGCAGAGGG ACGTCTACCT CCCGCGGGGG GCGTGGCTGG AGCTAAGCAC GGGGAAGACC CACCTAGGCC CCAGCTGGAC CCTCTCCGAG TCGGACATGC CGCTCTACAT CCGGTCGGGG TCGGCCGTGC CCGCCCAGGA TGGGCTTTAC ATATACGGGG AGGGGGCGTG GACGATCTAC ACAGACGGGG GCGTCGTGGA GGTTGCGAGA GAGGGCGGGA AGGTGAGGCT AAAGGGATGG ATGGGGAGTG TATATATCCT CGGCGAGAGG CTAGACGAGG TTTATATAAA CGGCGCGGCG AAAACAGGCG TTGCCACAAA ACTCGGCACC TATCTAGAGA CGACCTAG
|
Protein sequence | MSLELGRKSV KLALGRQILS FPLPGGEPRP AAEFDGKSLR ATCCGVGVEL LVERRGGATV VRKRLGAREH VFGLGTRAYP PDRRRGRFIL FNNDLYGYQL GMDPLYASIP FMVFVEDGRA FGLVVNSPAY GVVDVGFSKY SEAVVEVEDL PELYILFGEG PLDVYTTYSE VTGRPFLPPS WALGLHLSRY SYEPQDAAAE VVREVAREVP LDAVYLDIDY MEGYKQFTWD LKKFPDPAGF VHEIRELGVR VVAIVDPYIK AEPGYRPFRE LLDCLLVTEN DELFLARGWP GLSALPDFLN PKCRERWGDL IADFVKTYGI DGIWLDMNEP TVFNCDALAT RSRIYALVGA TPHGLTKEEL LCKAPRGAYH VVEGEKITHE RVRGLYPYFE AEATYRGLLK AGREPFILSR SGYLGIQKYA ALWTGDVPST WEGLRLTLMT VLGLSASGVP FVGADVGGFA GLGDYELIAR WYQAAAFFPI YRVHRDKGTT DAEPTRLPAR YRHMALEAIK TRLRFLPYLR HLAWAAHLHG YPIVRPLGLE FPDDEDAFKI HDEYMVGPFL LFAPIVDKGA KQRDVYLPRG AWLELSTGKT HLGPSWTLSE SDMPLYIRSG SAVPAQDGLY IYGEGAWTIY TDGGVVEVAR EGGKVRLKGW MGSVYILGER LDEVYINGAA KTGVATKLGT YLETT
|
| |