Gene Pars_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2040 
Symbol 
ID5054212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1823990 
End bp1824973 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content62% 
IMG OID640469589 
Productaminotransferase, class I and II 
Protein accessionYP_001154238 
Protein GI145592236 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTG CCTCCGCCAT TAGGCGTATC GAGGCGGCGC GGCCCAGACA CAGGCTGGAC 
ATCGGCGACC CAGACGTCCC CCCGCCACCT GAGCTGGTGG AGGCGCTGGG GCGCGTCGGC
GACCTCCACT ACGGCCCGCC CGAAGGCCTC CCCGAGTTTA GGGAAGCGGT TGCCTCGGCC
TTCGGCGTAG AGCCAAGCGA GGTGGTTGCA GTTGCGGGAG GACGCCACGG GCTGGCCGCC
TTGATGTGGA TCTTCCGCAA GAAGAGGCTA ATTACGCCGT TGCCCTTTTA CCCCGGCTAC
TTCGATATAG CGGGGGTCTT CGGCATCAGC TTGGAGGTGG TGGAGTCGGG GGACGGGTGG
GTGCCGAGCT TCTCGGAGCG GGGTATATAC ATCGTGAACT ACCCCAACAA CCCCACCGGC
ACTGTATTGC CGAGGGGGAA GGTGAGGGAG CTGGTTGACG CCGCGGAGTT TGTGATTAGC
GACGAGATTT ACAGAGACAT AATCTTCGGC GAGTTTATAT CTCCCCTGGA GCTCTCCCCC
AACGTCGCTG TGGTCTACTC CTTCTCCAAG GTCTTCTCAG CCCCGGGGCT GAGGATTGGG
GCTGTGGTTG CGCCCCGCGA GGTGGCCAGG GAGGTGGCCA GGTTCAACAA GGCCACTATA
AACGTCCCGC CTACCCACGT CCAGAGGGCC GTGGCCTTGG TAATAGACGT GTTGCCCCGG
AGGCGCCGCG AGGTCTCCGA GATATACCGC CGGAGGGCCG AGCTCGCCGC CAAGACGCTG
AGGCTCCCCT TCGTGAAGCC AGCCGGCGCC TTCTACATCT TTCCAAGGGC AAACGCCGGC
TGTTTCGAAA AAGCCCTACA AGTCGGCGTC TCTGTACTGC CCGGAGAGCT CTACGGCCGC
CCGGGACATG TGAGGATTGC CCTAGTAGAG CCAGAAGACG CCCTAGAAGA GGCCTTTGAA
GTTTTGAACC GGGCTTGTGG GTGA
 
Protein sequence
MDFASAIRRI EAARPRHRLD IGDPDVPPPP ELVEALGRVG DLHYGPPEGL PEFREAVASA 
FGVEPSEVVA VAGGRHGLAA LMWIFRKKRL ITPLPFYPGY FDIAGVFGIS LEVVESGDGW
VPSFSERGIY IVNYPNNPTG TVLPRGKVRE LVDAAEFVIS DEIYRDIIFG EFISPLELSP
NVAVVYSFSK VFSAPGLRIG AVVAPREVAR EVARFNKATI NVPPTHVQRA VALVIDVLPR
RRREVSEIYR RRAELAAKTL RLPFVKPAGA FYIFPRANAG CFEKALQVGV SVLPGELYGR
PGHVRIALVE PEDALEEAFE VLNRACG