| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2015 |
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| Symbol | |
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| ID | 5055082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1803303 |
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| End bp | 1804034 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640469564 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001154214 |
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| Protein GI | 145592212 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.900629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGACAG CTGTCGTCAC CGGAGGCTCC ACCGGGATAG GGGCGGCCAC TGTCAAAGCC
CTAGCTAAAA GAGGCTACGA CGTAGCCTTC ACCTACCTAA GAAGTGAAAA GGAGGCCGAG
TCCGTCGTCA AAGAGGCGTC TGGATACGGC GTAAGAATTC TGAGCGCGCG GGCAGACGCC
TCGTCCTGGG ACCAAATGAG GGCATTCGCC GACGAGGTGC GCCGCGTCTT CGGCAAAGTA
GACGCACTCG TGGCAAACGC CGGCGGGCTC CCCCAGCGGA GGACGCTGGA GGAATCCGAC
CTAGACTACT GGAAGGCGCT CATAGACCTC AACCTCACCA GCGCGTACAT AGCAACTAAG
CTGTTTGTCC CCATGATGGA GAGGGGCGTA GTGGTGTACG TCAGCTCCGT GGCGGCATAT
ACAGGCGGCG GCCGCGGCGC CTTTGTCTAT GCCGCCGCCA AGGCGGGGCT CCTCGGCCTC
ACGAGGGCGT TAGCTAAAGA GCTGGGGCCG AGGGGGGTTA GAGTAGTGGC GGTGCTACCC
GGACTAATAG ACACCCCCTT CCACAACAAG GCAAATACGG GTGACATAGA AACGTGGGCA
AGGAACATGG TCTATATGAA GAGGGTGGGG AGGCCAGGAG AGGTGGCAGA GGTCATAGCC
TTTTTAGTAA GCGAAGGCGC GTCGTACATA AATGGCGCCT TCATAGACGT CAACGGCGGG
TGGTACGGCT GA
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| Protein sequence | MPTAVVTGGS TGIGAATVKA LAKRGYDVAF TYLRSEKEAE SVVKEASGYG VRILSARADA
SSWDQMRAFA DEVRRVFGKV DALVANAGGL PQRRTLEESD LDYWKALIDL NLTSAYIATK
LFVPMMERGV VVYVSSVAAY TGGGRGAFVY AAAKAGLLGL TRALAKELGP RGVRVVAVLP
GLIDTPFHNK ANTGDIETWA RNMVYMKRVG RPGEVAEVIA FLVSEGASYI NGAFIDVNGG
WYG
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