Gene Pars_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2014 
Symbol 
ID5055753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1802772 
End bp1803278 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content61% 
IMG OID640469563 
Producthypothetical protein 
Protein accessionYP_001154213 
Protein GI145592211 
COG category[S] Function unknown 
COG ID[COG2410] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.920858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATGA TAGTCGCCGG GATAGACCTA GCCGTCGCCA AGCCCACAGC CGTGGCTACG 
CTTGACGGCT GTTCGCTGGT CTATCTAGGA CTCGCTTCTG CCGACGAAGA AATTGTACAC
GCGGCCTCTC TCTTAGACCC CGCCGTCGTA GCTATTGACG CCCCCCTCAC ATTGCCCGAG
GGCGGGAGGG GGCTTAGAGA CGTGGAGGTG GAGCTACGCA GGTTGGGGTA TAGGCTCCTG
CCGCCTCTTA TGGGCCCGAT GAGGGGGCTC ACTGAGAGGG GGATAAGGCT GAGCAGGATG
TTTAGGGCGG AGGTGATTGA AATTCACCCG GCGACTAGCC TAATGGCCAT GGGCTTGTCG
CGGGGCGAAC TACGCCGGAG GTTTGGCATA GGGCACGCCG ATTTGTTAGA CGCAATCGCG
GCGGCTCTCA CGGCGGTGGC ATACGCCGAG GGACGCTATA AGAGGATAGG GCCCTTCGTC
CTGCCCACTG CGAGGGTGTG CGTATAG
 
Protein sequence
MYMIVAGIDL AVAKPTAVAT LDGCSLVYLG LASADEEIVH AASLLDPAVV AIDAPLTLPE 
GGRGLRDVEV ELRRLGYRLL PPLMGPMRGL TERGIRLSRM FRAEVIEIHP ATSLMAMGLS
RGELRRRFGI GHADLLDAIA AALTAVAYAE GRYKRIGPFV LPTARVCV