Gene Pars_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2009 
Symbolrps8p 
ID5056422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1799110 
End bp1799502 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content50% 
IMG OID640469558 
Product30S ribosomal protein S8P 
Protein accessionYP_001154208 
Protein GI145592206 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATGC TTGACATATT GTCGAATGCG CTGATCCAGA TAAAAAACGC CGAGGTAATG 
GGCAAGAGGC AGGTGACTAT ATGGCCTGTG AATAAGCTAA CCTACTACAC TCTCCGCGTG
TTACAGAGAT ATGGCTACGT CGGCGAGATA GAGTACGTGG ACGACGGAAG AGGGGGAAAG
TACATAGTCC AACTCCTGGG CAAGATAAAC GACATAGGGC CTATAAGGCC GAGATACCCT
GTTAAGTACC GCGAAATCGT GCAGTGGGAG CAGAAATTCC TCCCGGCGAG GCAGATAGGC
ATATTGGTAA TATCTACCAG CCAAGGCGTC GTGTCCCACA TAGAGGCAAA GGAGAAGAAG
ATAGGAGGGG TACTGCTGGC GTACGTTTAC TAA
 
Protein sequence
MVMLDILSNA LIQIKNAEVM GKRQVTIWPV NKLTYYTLRV LQRYGYVGEI EYVDDGRGGK 
YIVQLLGKIN DIGPIRPRYP VKYREIVQWE QKFLPARQIG ILVISTSQGV VSHIEAKEKK
IGGVLLAYVY