Gene Pars_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2008 
Symbolrpl32e 
ID5054462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1798606 
End bp1799079 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content57% 
IMG OID640469557 
Product50S ribosomal protein L32e 
Protein accessionYP_001154207 
Protein GI145592205 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1717] Ribosomal protein L32E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAGCA CCTCTGTATC TAGGCCAAGG AAGGAGTTGC CTCAGCCTCT TCGAAGGCTA 
CTGAGACTGC GCCTACTCAT GAAGAGGAGG AAGCCGGACT TCGTGAGAAT TGACCAATGG
CGCTACAAGA GGATTGAGGA CAGCGGTTGG CGGAACCAGA GGACTCTCGA CAACAAAATC
AGAAGGAAGT GTAAGGGCTG GCCGAGGCCT GTGGAGGTGG GGTATAGAAA GCCGGCTGAG
GTGCGGGGGC TACATCCCAG CGGCTTTGTT GAGGTGCTGG TCCACAACGC GGAGGAGCTA
GCAAGACTTG ATCCCAAGAC CCACGCGATC AGGATCGCCG GCACCGTGGG ACTGAGGAAG
AGGCTTGAGA TTGTGAAGAG GGCGAGGGAG TTGGGGTTCT ACGTCCTTAA CCCTGGGAAG
AGGGTTGAGG AGCGGTTGAA AAAAGAGTTA AATACCGCCC AGTCTGGGCA GTAG
 
Protein sequence
MSSTSVSRPR KELPQPLRRL LRLRLLMKRR KPDFVRIDQW RYKRIEDSGW RNQRTLDNKI 
RRKCKGWPRP VEVGYRKPAE VRGLHPSGFV EVLVHNAEEL ARLDPKTHAI RIAGTVGLRK
RLEIVKRARE LGFYVLNPGK RVEERLKKEL NTAQSGQ