Gene Pars_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2000 
Symbol 
ID5054496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1791247 
End bp1792191 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content55% 
IMG OID640469548 
Productthioesterase superfamily protein 
Protein accessionYP_001154199 
Protein GI145592197 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTT CAGAGACTCT GGTAGAGAAT CTTAGGCTTG TATCTCAGAG GCATGTGAAT 
CCTCTCGGCA CATTGTATGG GGGGTACATG TTGCTCTGGC TTGTCGACTC TGGCTCCGTG
GCGGCGATGA ACTTCGCCGA GGGCGATGCC GCCCTGGGAT TTCTGGATAG GATACACTTC
GTGCACCCGG TCAGGCTTGG AGATCTTGTT TTGTTTAGGG CTTGGGTCGT GGGTGTCCGC
AAATCCAGCA TGTCGGTGTT GGTGGAGTCT TACGTGAAGA GGGGCTCAGA ACTTGCCTTA
GCCACCGTGG GTAGGATGAT ATATGTCAAG ATAGACCAAA ACGGGATGCC GCAACCAGTG
GGGAAGGCCG TGGAGTGTGA TAAAGGCTGG GAGAAACTGT GCGGCTATTT CCAGCAGTGG
AGGTCGTGGG CCGACTCTGT CATTGAGGCA GAAGGCCCCT CCGCTGATGC GTCTTGGCAC
TCGGTAAGCC GCTTCTTGGC GATGCCTGAG GATTCTCTTG ACGGCGTCTT GATGTACGGG
GGGAGGCTAC TCTTTAGGCT CGACGAGTTG GCCTTCATTG AGGCCTTTAG TTACTACCCA
ACTGTGTACG TAACTGCGAG CGTAAACCGC ATAGTGTTCA GGAAGGCGAT ATTCGTGGGG
GACATCGTAG AAGTGAAGAC GGGGGTTACC TACGTTGGGA CGACTAGCAT TGAGGTGGGG
TTCGTGGTGG AGGCGTACGG ATTTAGGGGA AGGCGGAGAG TTGCCGACGG ATACTTCACT
TTTGTGAACA TGGCTGGCGG CCGGCCCAGC GAGATAAAGG CGCCCCAGCT AGGCGACGAG
GCTGCTAGAA TGCGGAAAGA GGAGAGCGTG AAGGAGGCCA AGATGTTGAG GGGGTTGAAA
CCCCCTGAAG GGGAACAACC GTGGCTACTT AGTCTACTTT TATAG
 
Protein sequence
MRVSETLVEN LRLVSQRHVN PLGTLYGGYM LLWLVDSGSV AAMNFAEGDA ALGFLDRIHF 
VHPVRLGDLV LFRAWVVGVR KSSMSVLVES YVKRGSELAL ATVGRMIYVK IDQNGMPQPV
GKAVECDKGW EKLCGYFQQW RSWADSVIEA EGPSADASWH SVSRFLAMPE DSLDGVLMYG
GRLLFRLDEL AFIEAFSYYP TVYVTASVNR IVFRKAIFVG DIVEVKTGVT YVGTTSIEVG
FVVEAYGFRG RRRVADGYFT FVNMAGGRPS EIKAPQLGDE AARMRKEESV KEAKMLRGLK
PPEGEQPWLL SLLL