| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1972 |
|---|
| Symbol | rps15p |
|---|
| ID | 5054489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1767695 |
|---|
| End bp | 1768159 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640469519 |
|---|
| Product | 30S ribosomal protein S15P |
|---|
| Protein accession | YP_001154171 |
|---|
| Protein GI | 145592169 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCCCG TGCCACACCG ATCGCGCCAT AAGAAGGGTA GATCTGGATC GGTGCGCCCA
GCCCACCCAA CAGTGCCTAC ATGGATACAG TACACGCCCG AGGAGGTTGA GCAACTCGCA
GTAGAGCTGG CGAGGCGCGG CTTTCAGCCT TCACAGATTG GGATTGTGCT CAGAGACCAA
TACGGAATCC CACTCGTGAA GTCGATTACT GGGAAGAAGC TTGTCAAAGT TCTTGAAGAG
CATGGGATAA AGTACGAGAT TCCGGAGGAT CTGCTTAACC TCATCCGAAG AGCTCTTAGA
ATTAGGAAAC ACTTAGAGGA GCACCCCAAA GACATGTCGT CGCGGAGGGG GCTTCAGCTG
GTGGAGTCGA AGATCCACCG CCTTATTAAG TACTACAAGC GGGTAGGCAG GCTACCGAGG
GACTTCGTAT ATAACCCACA AGCCTTGTCC CATTTGGCGA CCTAG
|
|---|
| Protein sequence | MAPVPHRSRH KKGRSGSVRP AHPTVPTWIQ YTPEEVEQLA VELARRGFQP SQIGIVLRDQ
YGIPLVKSIT GKKLVKVLEE HGIKYEIPED LLNLIRRALR IRKHLEEHPK DMSSRRGLQL
VESKIHRLIK YYKRVGRLPR DFVYNPQALS HLAT
|
|---|
| |