Gene Pars_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1971 
Symbol 
ID5054499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1766928 
End bp1767587 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content55% 
IMG OID640469518 
Producthypothetical protein 
Protein accessionYP_001154170 
Protein GI145592168 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACG TACCCTTCGT CGCAACGCCT GAGGTGGTGG TCCGACGTAT GCTTCAACTT 
GCCCGGGTCC AGAAGGGGGA GGTGCTCTAC GACCTCGGCT CCGGCGACGG CAGAATTGTC
ATAATTGCCG CAAAGGAATT CGGCGCCAAG GCGTTCGGCG TGGAGATCCG GAAGGATCTA
TACGAACAGT CCATGGCCCG TATCAAGGAT CTTGGACTTG CGCACACGGC TACTATAATT
AACGCCAGCT TCTACGACGT ACCTCTTACA GAGGCCGACG TAGTCACCAT GTACCTCCTC
ACCAGCGTAA ACGAGCGACT TAGGCCAAAG CTTGAGAAAG AGCTTAGACC TGCAACACGT
GTGGTGACTC ACGACTTTGA AGTACCAGGG TGGAGGCCGG TGGTTGTCGA AGAGATATAC
GAGGACTGGC GTAGCCACAA GCTGTTCTTA TACAAAATCC CGGGGAGAGA GGTCCCCGTG
CCAGGGAAGT CCATCCAGCT TGAGGACAAG TGGCTACGCC AAGTGGCTGA GCTGGTAGAC
GGGGTCAGAT CTGTGGAGGA GATTGCGGGG AAGCTGGGCG TGACTATCAG AAAGGTAAGG
GAGGCCCTAG AGGAGTTGAG AAAACTGGGA GTTGTCGACG AGGTGAGGAT CATTAAATGA
 
Protein sequence
MYDVPFVATP EVVVRRMLQL ARVQKGEVLY DLGSGDGRIV IIAAKEFGAK AFGVEIRKDL 
YEQSMARIKD LGLAHTATII NASFYDVPLT EADVVTMYLL TSVNERLRPK LEKELRPATR
VVTHDFEVPG WRPVVVEEIY EDWRSHKLFL YKIPGREVPV PGKSIQLEDK WLRQVAELVD
GVRSVEEIAG KLGVTIRKVR EALEELRKLG VVDEVRIIK