Gene Pars_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1970 
Symbol 
ID5054512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1766053 
End bp1766931 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content55% 
IMG OID640469517 
Productputative deoxyhypusine synthase 
Protein accessionYP_001154169 
Protein GI145592167 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1899] Deoxyhypusine synthase 
TIGRFAM ID[TIGR00321] deoxyhypusine synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGACA TAATAGAGGT CTACCGTAAA ATAGGCGGTT TTCAAGCTCT CCACGTCGCC 
GAGGCATATG ACGTGCTGAA AGAGGCCGTA GAGAAGGCGG ATCTCCGTTT CTTGTCCTTC
ACAGGCAACC TCGTAGCCAC CGGGGTGAGG GAGATAATCG CCGATGCCAT ACGGAGGAGA
TTGTTCAACG TGGTAATAAC CACGGCCGGA GCGCTAGACC ACGACATCGC CAAGAGTATG
GGCGCCCGTT ATGTTCCAGG CTCTTTTGAT CTAGACGATG CCGATCTAGC ATCAAGGGGG
TTACACAGGC TGGGAAACGT GGTAATTAGA CGCGAGGAGT ACGGTCCCCT CATCGAGAAG
TTTGTGCTAA GGCACTGCGA AGAGCTCTGG GGGCGGGTTC TGGCCACGTA CGAGTTGGCG
GAGATACTCG GCAAATCCCT CCCAGAGGAC TCTATTCTTG GCGCGGCGGC GCGGGCCGGA
GTTAAGGTCT TCGTACCGGG GATAGTGGAC GGCGCTGTGG GGACGGCGCT TCTGACATGC
AACGATTTAG CCAGGACGAG GAGGGGGGCT ACTAAACTGC TGGTCGACGT CTTAAAAGAC
GAAGAGGAGC TAAGAGAGTT GGTCTACAAC AGCGATAAAC TTGCGGCGCT TATTGTGGGG
GGCGGCATAA GCAAACACCA CGTGATCTGG TGGGCTCAAT TCAGGGGAGG GCTCGACTAC
GTGGTATACA TCTCGACGGC TGTTGAATAC GATGGCTCCC TCAGCGGGGC TAGGCCGAGG
GAGGCGGTAA GCTGGGGTAA GGTCAAGCCA ACAGCTAGAT CTGTCTACAT CTTTGCAGAC
GCTACTCTTG TATTGCCTGT GTTATTAAAG GCTTTGTGA
 
Protein sequence
MRDIIEVYRK IGGFQALHVA EAYDVLKEAV EKADLRFLSF TGNLVATGVR EIIADAIRRR 
LFNVVITTAG ALDHDIAKSM GARYVPGSFD LDDADLASRG LHRLGNVVIR REEYGPLIEK
FVLRHCEELW GRVLATYELA EILGKSLPED SILGAAARAG VKVFVPGIVD GAVGTALLTC
NDLARTRRGA TKLLVDVLKD EEELRELVYN SDKLAALIVG GGISKHHVIW WAQFRGGLDY
VVYISTAVEY DGSLSGARPR EAVSWGKVKP TARSVYIFAD ATLVLPVLLK AL