Gene Pars_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1959 
Symbol 
ID5054607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1757509 
End bp1758318 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content58% 
IMG OID640469506 
ProductNAD-dependent deacetylase 
Protein accessionYP_001154158 
Protein GI145592156 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCGTC ACGGATCGGA ACAGCCTGGG TCATCATTAA TAAAGACTTA CACATTGCTA 
TTTATGAATG TCGCCAATGT GCTAGCGGCC TCGAGGCACT GCATTGTGTT CACCGGCGCT
GGGATCTCCG CCGAGAGCGG CGTACCAACT TTTAGGGGAC TCGGAGGGCT TTGGGAGCGC
TATCGACCGG AGGAATTGGC AACGCCAGAG GCCTTTGCCA GAGACCCCGA GCTGGTATGG
CGGTGGTACA AGTGGCGCCA GGAGGTTGTA TACAACGCCA GGCCCAACCC CGGCCACATG
GCAATTGCGG AGCTGGAGGC GCTTGGCGTG GTGAAGGCCG TCGTGACGCA GAACGTCGAC
GGCCTCCACC AGAGGGCGGG AAGTAGGAGG GTGGTGGAGC TACATGGCTC GCTGTGGCGT
ACTAGGTGTA CTAAATGCGG CGCCGTCTAT AAGCTAGAGA GACCGGTGGA TGAGGTGCCC
CCGAGGTGCG GCAAGTGCGG CGGCCTTCTT CGGCCAGATG TGGTGTGGTT TGGCGAGCCC
TTGCCCCGAG ACGCATGGAA TGAGGCAGTA GAACTAGCCA GGATCTCAGA TGTGGTGCTA
GTTGTAGGCA CATCGGGGGT TGTCTACCCC GCCGCCTATA TACCACACAT AGCTAAGCAA
GGCGGCGCGG TAGTAATAGA AATAAACGTA GAGCCCTCGG CGCTTACGCC TATGGCAGAC
TACTTCATAA GAGGGAGAGC AGGAGAGGTT TTGCCACAGA TAGCGGAGGA GGTTAAGAAA
AGGCTCAGAA CCCGCCTTTA CACGTCATGA
 
Protein sequence
MSRHGSEQPG SSLIKTYTLL FMNVANVLAA SRHCIVFTGA GISAESGVPT FRGLGGLWER 
YRPEELATPE AFARDPELVW RWYKWRQEVV YNARPNPGHM AIAELEALGV VKAVVTQNVD
GLHQRAGSRR VVELHGSLWR TRCTKCGAVY KLERPVDEVP PRCGKCGGLL RPDVVWFGEP
LPRDAWNEAV ELARISDVVL VVGTSGVVYP AAYIPHIAKQ GGAVVIEINV EPSALTPMAD
YFIRGRAGEV LPQIAEEVKK RLRTRLYTS