| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1940 |
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| Symbol | |
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| ID | 5054919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1743110 |
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| End bp | 1743661 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640469486 |
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| Product | ribosomal biogenesis protein |
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| Protein accession | YP_001154139 |
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| Protein GI | 145592137 |
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| COG category | [A] RNA processing and modification
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2136] Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGAGGG CAGATAGTTG TGAAGTCGTA ATAACTACGT CGAGACTTCC CTCAAAGAAA
ACGCTGGAGC TGATAAACGA CCTTGTCAAC TCTCTGCCAG GTGTAGAGAA AGTAGTTAGG
GGGAAGAAAC CCTTCACCTC CCTCCTCGAA GAGGCTGTTA TTCGAGGTGC GCGGTACATC
GCCTTTATCT GGGATAGGCG CGGTATGCCG TCAGCGCTGT TGTTCTACGA CGTGGTTAAC
AAGATGTGGA AGCCCTACAT GCTTAAGATC TCTGGCATCA AGACGAGGAG AGAGCTACCT
GTCTTCACCG CTCGGAGGCC GCCTGCAAAA AGCGCCGTCG TGGTTGATTT GGCCGGAGGG
GAGCTTGGGG ATATATTTGC TGAGATTTTC CGATACCCTC TTGTATACGA CTTAGACGCC
GTGAGGGGCC TATTTGACAC CGTTATACTG GTTAGGCCAG GTGATCGCTA CGTCGTTGAG
GTGCTCGGCA GAGACCTAGG CCCGAGAGCT ACAGTCATAA AAATCGCAAA GGTGATATAT
AGGCATGTAT AA
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| Protein sequence | MKRADSCEVV ITTSRLPSKK TLELINDLVN SLPGVEKVVR GKKPFTSLLE EAVIRGARYI
AFIWDRRGMP SALLFYDVVN KMWKPYMLKI SGIKTRRELP VFTARRPPAK SAVVVDLAGG
ELGDIFAEIF RYPLVYDLDA VRGLFDTVIL VRPGDRYVVE VLGRDLGPRA TVIKIAKVIY
RHV
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