| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1937 |
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| Symbol | |
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| ID | 5054939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1740842 |
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| End bp | 1741582 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640469483 |
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| Product | exosome complex exonuclease Rrp41 |
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| Protein accession | YP_001154136 |
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| Protein GI | 145592134 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR02065] archaeal exosome-like complex exonuclease 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGC CGCCTGTACC TTTGCTTCAG AACGGCGTTA GGGCTGATGG GAGATTGCCT
GACCAGATGA GGGAGGTTAA AATTTCGGTA GGCGTAGTCA GCAACGCCGA CGGATCGGCA
ATGGTGTCCT ACGGCGCCAC TACGGCGGTG GCCGCCGTCT ATGGGCCCAG GGAGATGCAC
CCTAGACATT TATCGCTTCC TGACCGCGGT GTTATGCGTG TGCGTTACCA CATGGCCCCC
TTCTCCACGA AAGATGAGCG GAAGAGTCCT ACGCCTAGTA GAAGAGAGAT AGAGATATCT
AAGGTTCTGA GAGAGGCTTT AGAGCCAGCC GTACTGCTGG AGCAGTACCC CCGCTCGCGT
ATAGACGTCT TCATAGAGAT AATCCAGGCA GATGGCTCAA CGAGGGTGGC ATCACTGACG
GCGGCATCGC TAGCCTTAGC CGACGCCGGG ATCTACATGA GAGACCTAGT AGTAGGAGTA
TCAGTAGGTC TAGTCGACGG CGTGGTGGTG CTTGATCTGA ACGGCCTCGA AGATAACTAC
GGCGAGGGCG ACCTTCCTGT TGGGTATATG CCTAACTTAA AACGCTTCGT GCTCCTACAG
CTAGACGGGG CGTGGAAGCG CGAGGTCTTC TTACAAGCGC TTAATCTGGC GGTCAAAGGC
GCAGAGTACG TCTACCAAAT TGCAAGAGAC GCGTTGAAAA ACAAGTATAT GTCCATAGCT
GAGGAGATAT ACGGGAGGTA G
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| Protein sequence | MKKPPVPLLQ NGVRADGRLP DQMREVKISV GVVSNADGSA MVSYGATTAV AAVYGPREMH
PRHLSLPDRG VMRVRYHMAP FSTKDERKSP TPSRREIEIS KVLREALEPA VLLEQYPRSR
IDVFIEIIQA DGSTRVASLT AASLALADAG IYMRDLVVGV SVGLVDGVVV LDLNGLEDNY
GEGDLPVGYM PNLKRFVLLQ LDGAWKREVF LQALNLAVKG AEYVYQIARD ALKNKYMSIA
EEIYGR
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