| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1935 |
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| Symbol | |
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| ID | 5054965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1739247 |
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| End bp | 1739945 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640469481 |
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| Product | putative RNA-associated protein |
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| Protein accession | YP_001154134 |
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| Protein GI | 145592132 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1500] Predicted exosome subunit |
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| TIGRFAM ID | [TIGR00291] rRNA metabolism protein, SBDS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAAA AGGCGGCAGT GGCCAAGCTG GATAAGGGTG GTGAGCATTT TGAGATACTA
ATAGATCCCG ACGCGGCGTT GGAATTCAAA ATGGGGAAGC CCATGGGGAT AGACAAAATC
CTAATCCATG AGGAGATTTT CAAAGATGCG AAAAAAGGCC TCCGCGCCTC CGAGCAGGCG
CTGAAGCGTA TCTTCGGCAC GACCGATGTG AGGAAAATAG CCGAAATTAT AATAAAGGAG
GGAGAGATAC CCCTTACAGC CGAGCAGAGG AGGAGGTTAA TAGAGGACAA GAAGAGGCAG
ATCGTGGAGT GGATATCGCG GAATTGTATC GATGTACGCA CCAAGACACC AGTACCGCCG
CAACGCGTTG AGAACGCCCT AGATCAAGTC AGAGTTTCCA TAGACCCGTT TAAGCCACCA
GAAGAACAAG TTCAGGAAAT CCTGAAAGAA ATACAACGCG TCTTACCGAT TAAGGTGGCG
ACTGCCCGAA TCGCGCTGTC TGTCTCATCT ACTCACGCCC AGAAGGTTAA GGGCATTGTT
GCCAAAATGG CTAAGATAGT AAATGAGAGG TACAAATCAG ACGGATCCTG GGAAGCCGTG
CTAGAGCTAC CGGCGGGGCT CCAAGACGTC CTCATTTCTA AAGTAAACGA CGTGACACAT
GGCGATGCCG ACATACGCAT AGTAGAAATC GTCTTCTAG
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| Protein sequence | MTKKAAVAKL DKGGEHFEIL IDPDAALEFK MGKPMGIDKI LIHEEIFKDA KKGLRASEQA
LKRIFGTTDV RKIAEIIIKE GEIPLTAEQR RRLIEDKKRQ IVEWISRNCI DVRTKTPVPP
QRVENALDQV RVSIDPFKPP EEQVQEILKE IQRVLPIKVA TARIALSVSS THAQKVKGIV
AKMAKIVNER YKSDGSWEAV LELPAGLQDV LISKVNDVTH GDADIRIVEI VF
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