Gene Pars_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1922 
Symbol 
ID5055147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1727581 
End bp1727907 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content53% 
IMG OID640469468 
ProductDNA/RNA-binding protein albA 
Protein accessionYP_001154121 
Protein GI145592119 
COG category[K] Transcription 
COG ID[COG1581] Archaeal DNA-binding protein 
TIGRFAM ID[TIGR00285] DNA-binding protein Alba 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.511261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGGAG GCGAAATTGT TAAAAACCCC AACTGTTCTG CCAGTCCTAT GGCGACAGAA 
CAGACAATAC TAGTGGGAAA AAAACCCGCG ACGAACTACG TAATTGCAAC GGTGATGGCG
TTCAACGCAG GCGTTAAGAA GGTGGTGCTT AAAGCAAGAG GGGCAGCCAT ATCGAAGGCG
GTGTCGACGG CGGTAATGGT ACGCGACCGC TTTTTGCCCG GCAAGGTGCA GATCAAAGAC
GTCAAGTTGC TAAGCGACAA GGTACAGGGC CAAGGAGGTA GGGAGAGGAC GGTAGCTGCT
GTTGAGATAG TCCTCGAAAT GGCCTAA
 
Protein sequence
MRGGEIVKNP NCSASPMATE QTILVGKKPA TNYVIATVMA FNAGVKKVVL KARGAAISKA 
VSTAVMVRDR FLPGKVQIKD VKLLSDKVQG QGGRERTVAA VEIVLEMA