Gene Pars_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1916 
Symbol 
ID5055254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1721603 
End bp1722676 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content54% 
IMG OID640469462 
ProductVWA containing CoxE family protein 
Protein accessionYP_001154115 
Protein GI145592113 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC CAGCGGATTT GGTATTAAAA ATTAGTGAGT GCCTCGGCGG CCTCTCCACC 
CGTAGCCTAA TATATGCAGT TGCTGATATC TACGCGAGGT TGTACCTTGG CGAAATAGAC
GAGGAGAAGG TCCTGGAAAT TATTGCGCAG AACCTCGCCG GTGTTTTAGG CACCACGCCA
AGCGGCGCCA AGAAACTTAT AACAGAGGCG TGCGGTCCAA AACCGGTCGA GGCGGCGGCG
CCGACGTTGA CTACAGCCTC CGTGGGGGCG GAGAAGGCGC CGACTCTGGC ACATCTCGTT
AACAGACATG TCCCCGTAGA CGCGCCGCCC CGGGCGAAGT TGGAGGTAAT AAAGAGGCTG
AATCTGCCCA CCGACGCGCT GGGCGAATAT AGGCATAAGA TCTCCGCACG GGGAGAAGGG
GAGTTACATG TAAAAACCGC GGTTACTACC ATAAGGACGT ACTACCCAGG CGCCTCTACT
GTTGACGTAG ATCTGGTAAG GACGGCGCTG GCTTTTTCGA GGAGGAGGGC CTCCGGACAG
CCCATCTCCG ACTCCGATAT CTACATACGT GAATACGCAC ATGTAGTTGA CAAGCCTGTG
TACGTCGCCT TGGACGTTTC GGGCTCTATG AAGGAGTACA TGGGGGGAGC CACTAAGCTG
AAGATAGCCA AGGACGCGAT TGCGAGGTAT ATCAAACAAA TGGCGGAGCT ACGCGGCAAT
GTGTCGCTTA CGCTTTTCAA CGCCGACGCC GACTATATGT GGACTCCCCA CCCCGCCCAC
AGATATTTGA AAGAGATGCT GGAAATTTTG AGATACGTCT ACTCGATGGG AGGTACCGAG
ATAGCCTCCG CCCTGGAGCT TCTTCATGCC GACGCGGCGC GGAGCCACGT TGTAATTATA
TCAGACGGCA GAACAAACGA CCCAGAAAAG GTTCTCCAGC TTGCCAAGAA GTTTAGAAGA
ATTCACACAG TCGCGGCGGA GAGGAGCCGT CTTTTAAAGC AAATCGCCAA AATAACCGGC
GGTAAATACA GAGAGCTGAA CCCCACTCTA GATCTGTTAA GTCTACATAC TTAA
 
Protein sequence
MSSPADLVLK ISECLGGLST RSLIYAVADI YARLYLGEID EEKVLEIIAQ NLAGVLGTTP 
SGAKKLITEA CGPKPVEAAA PTLTTASVGA EKAPTLAHLV NRHVPVDAPP RAKLEVIKRL
NLPTDALGEY RHKISARGEG ELHVKTAVTT IRTYYPGAST VDVDLVRTAL AFSRRRASGQ
PISDSDIYIR EYAHVVDKPV YVALDVSGSM KEYMGGATKL KIAKDAIARY IKQMAELRGN
VSLTLFNADA DYMWTPHPAH RYLKEMLEIL RYVYSMGGTE IASALELLHA DAARSHVVII
SDGRTNDPEK VLQLAKKFRR IHTVAAERSR LLKQIAKITG GKYRELNPTL DLLSLHT