Gene Pars_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1904 
Symbol 
ID5055363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1709832 
End bp1711010 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content53% 
IMG OID640469454 
Productaminotransferase, class I and II 
Protein accessionYP_001154107 
Protein GI145592105 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGCT TATCTCCCAG GATAGGGGCA CTCCGAGAGT CTCCTACACG TAAAATAGAC 
GAGCTTCGTG AAAGGCTTAG AAGAGAGAAA AGAGACGTAA TACTTCTCTC GACCGGTCAG
CCCTCGATAC CCCCACCTCG TGAGGTAAGA GAGGCCATGG CGGAGTTGTT AAAGGTAGAC
TCAATGGAGC TGTACGGCTA CACGCCCAGT CAGGGTATCT ACGAGACTAG AGAAGCCATA
TCTGAGGATT TGAAGAAACT AGGCGGTCTA GAGGTGTCCC CCGAGCAGAT AGTGTTGACT
GCTGGTGGCC AAGCCGCTAT GTTTTCCACG CTTGCCGTGC TGATAGAGCC CGGCGATGAG
GTAGTGGTGA TGGATCCCAC ATACTTTGGG TATCGGCCGT TGTTGGAGTA CTTCGGAGCT
GTGGTTAAGA CAGCGGGCAC TCGGCTGGAG AAGGGGTTCC AGCCTGAAGT GGAGGTGTTA
AAATCTGTAG TGAGCAGGAG GACCAAGGCG ATGATAATAG TGACTCCAGA CAACCCCACT
GGCCGTGTTC TTAGAGAGGA CGTGGCTAGG GCAATAGCCG ATTTGGCGAG AGATTTCGAC
TTCTGGATTC TCACAGATGA GGCGTACAAG ACACTCATAT ATGAGGGCAA CCATGTCTAC
TTCTATAAGC TGGCTCCAGA GCGCACCATT TCAATAAACA CCTTTTCAAA AGACCCCGCT
ATACCTGGGT GGAGGCTCGG CTATGTCTAC GGCCCAGCTG AGGTTATGCC CAAGATTAAG
CTGGTCAATG AGGAGATGGT GTACTGTCCG CCCTCGTTTG CCCAGAGACT TGTGGCCCTC
TACCTACGCT CTGAGGTCAG AATGCGCTAT ATAAGAGAAG TTGTGGAGAT CTACCGCCAG
AAGAGAGACG TGGCGGTGAC GGCGTTGCGG AAGTATATCC CCGAGGCCAA GTTCGCAGTG
CCCGCCGGCT CGATGTTTAT CTTTGTGGAC CTATCTAGGT ACTTAAACGA CAGTGAGAGC
TTCGCCAGAG ATCTACTGGA GAGACACGGC GTGGCCGTAG TGCCGGGGTC TTATTTCAGT
GAGTACTACA AGGCGGCTGT GCGCATATCC TTTGTCACCG AGACGCCGCA GAGGATAGAC
GAAGGAATTC GTAGAATAGG CGAAGCCCTC AACGCGTGA
 
Protein sequence
MRGLSPRIGA LRESPTRKID ELRERLRREK RDVILLSTGQ PSIPPPREVR EAMAELLKVD 
SMELYGYTPS QGIYETREAI SEDLKKLGGL EVSPEQIVLT AGGQAAMFST LAVLIEPGDE
VVVMDPTYFG YRPLLEYFGA VVKTAGTRLE KGFQPEVEVL KSVVSRRTKA MIIVTPDNPT
GRVLREDVAR AIADLARDFD FWILTDEAYK TLIYEGNHVY FYKLAPERTI SINTFSKDPA
IPGWRLGYVY GPAEVMPKIK LVNEEMVYCP PSFAQRLVAL YLRSEVRMRY IREVVEIYRQ
KRDVAVTALR KYIPEAKFAV PAGSMFIFVD LSRYLNDSES FARDLLERHG VAVVPGSYFS
EYYKAAVRIS FVTETPQRID EGIRRIGEAL NA