| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1896 |
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| Symbol | |
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| ID | 5055511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1702159 |
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| End bp | 1703229 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640469445 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001154099 |
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| Protein GI | 145592097 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.881035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCTC TAGCCAAGAC TCTCCTTGTT AAGGCCATAA CCCTGGTCGT GGTTTTGATA
GGCGTGTTAG TGCTTCTAGC AGTAATAATG GGAGCCACCG GCCTCTCTGA TAAAATGCTA
AACTCGATCC TCACGTCGGA GGTGCAGGAG TATAAACAAC AACTTTTAAG ACAGGGCAAA
GACATAGCCG CAATAGAAAA GGCTGTTGAG GAGTTTAAAA AAGAAAGAGC GGCGGCGCTG
GGAATAGACA GGCCTTGGTA CGAGAGGATG CCCCAGTTGA TCTACCGCCT CCTCGTCTTG
GATCTCGGCA ATTCAAGAAC GTTGCAGTCG TCGTGGGGGT CTAACAGAAT AGCCGATCTT
ATACTAGATC GACTGCCCAA TACCATAATT TTGACAACTA CCGGCATTTT ACTCACAGCG
CTTGTAGGCA TATGGATGGG GCTGTACATG GGGGCTAATA TTGGGAGTAG AGCCGATAGG
GTCGTGTCAA TTTTGTCGGC GGCGTCTTAT GCCTTGCCGC TGTGGTTTGT TGGTCTTGTC
CTGATACTAG TGCTTGCCTA CGGCCCCAAG ATACTGTGGG GCGTCCAGAT ATTTCCGCCG
GGAGGCATGG TATCTACGCC TCCGCCGAAG GAGCCTCTGG CCTATGTATT AGACGTAATG
TGGCACCTTT CCCTACCTCT GCTTGCCTCC TTTATTGTCT TTTTTGGGAG CTGGGCCTAC
ACTACTAGGA ACATTGTCTT CAGCGTATCA CAGGAAGACT TTGTTAACTT TGCCAGGGCA
AAGGGACTGC CGGAAGATAT GGTAAGAAAC AGGTACATAC TTCGTCCCTC ACTTCCACCC
ATCTTGACTA ACCTAATTCT GAGCCTCGCG GCCTCGATCT CGGGGTATAT CATTACGGAG
AGGGTTTTCA ACTGGCCGGG CATGGGGTCG CTGTTCTACG CCGCAATAAC GGCACTCGAC
GAGCCGGTAA TCTTCGCATT GACATACGTC TTTACGCTTG TGTATATAAT AGGGAGGTTT
ATACTAGAAA TACTCTACGT CTTACTCGAC CCCCGAATTA GGTTATCATG A
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| Protein sequence | MASLAKTLLV KAITLVVVLI GVLVLLAVIM GATGLSDKML NSILTSEVQE YKQQLLRQGK
DIAAIEKAVE EFKKERAAAL GIDRPWYERM PQLIYRLLVL DLGNSRTLQS SWGSNRIADL
ILDRLPNTII LTTTGILLTA LVGIWMGLYM GANIGSRADR VVSILSAASY ALPLWFVGLV
LILVLAYGPK ILWGVQIFPP GGMVSTPPPK EPLAYVLDVM WHLSLPLLAS FIVFFGSWAY
TTRNIVFSVS QEDFVNFARA KGLPEDMVRN RYILRPSLPP ILTNLILSLA ASISGYIITE
RVFNWPGMGS LFYAAITALD EPVIFALTYV FTLVYIIGRF ILEILYVLLD PRIRLS
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