Gene Pars_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1889 
Symbol 
ID5055566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1697490 
End bp1698227 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content56% 
IMG OID640469438 
Producthypothetical protein 
Protein accessionYP_001154092 
Protein GI145592090 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGTGT TCGTCGGCAC ATGCGGCTTC CCCAAGGCAC GCCGCGTCAT ATTCAATACG 
CTAGACGCCG CGGAGTTGCA GGAAACGTTT TACAATCTGC CAGACCCCGA GAGAATGTCT
TCTCTCAGAA GAGAAGCTCC CGACTTCCAC TTCACGGCGA AGGTGTTCCA AGGTATTACC
CACCCTCCCG GTAGCCCCAC GTTTAAAAGG ACAAGGGGGT TTAGGCCAAC GGAGAGGCAC
GGCCTGCTAA AACCCACCAG GGAGAATATG GAGCTGTGGG AGCAGTTCAC GGCGGCTGTA
GCCCCCCTGC GCCCGGAGGT GTTGGTAATT CAGACGCCGC CTAGCCTTAA GCCAGAGCCT
TACATATACG ACTTCTTCAC CGCGGTGGCG GGGAAGTGGA AATTGGCGTG GGAGCCAAGA
GGCGAGACTT ATAACGACCC CAAGCTCATT GGGAAGGTGG CGGAGCTTGG GGTTATAATC
GCAGTGGACC CCCTGAGGAG GGATCCCCCG CCCGGCGAGA TATACTACTT CAGACTTCAC
GGACTTGGGA GAGGCGAAGT TAACTACAGA TATAAGTATA CGGCAAGCGA CTTAGCGAGG
CTCGCTTCAT TGGTAAGGGG ATTGGAGGGG GAGTTTGCTT ATGTGATGTT CAACAACGTG
TATATGTACC AAGACGCTGC GGAGTTCAAG TCGCTCCTCA GCCAGCTAGC GCCGCTTAGC
CACGACGTAG ACGGCTAG
 
Protein sequence
MQVFVGTCGF PKARRVIFNT LDAAELQETF YNLPDPERMS SLRREAPDFH FTAKVFQGIT 
HPPGSPTFKR TRGFRPTERH GLLKPTRENM ELWEQFTAAV APLRPEVLVI QTPPSLKPEP
YIYDFFTAVA GKWKLAWEPR GETYNDPKLI GKVAELGVII AVDPLRRDPP PGEIYYFRLH
GLGRGEVNYR YKYTASDLAR LASLVRGLEG EFAYVMFNNV YMYQDAAEFK SLLSQLAPLS
HDVDG