Gene Pars_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1888 
Symbol 
ID5055575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1696686 
End bp1697522 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content61% 
IMG OID640469437 
Productabortive infection protein 
Protein accessionYP_001154091 
Protein GI145592089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTGT TTCTGGCCTT GGCGTACATA TTCGCGGTTA TCTTGGATCT CGCCGCCGCG 
GCGGGGGGTG CTCCATTTCT GGCAGTTTGG GGTGTCGCGA GGATGTGGAG CGTTGCTGGG
GCGGCTTCTT TGGCCCTCCT CTTGAGAGGC GAGCCTGTAC GTGCATCGTT AAGGAGGTGG
CTTTCGGTGT CGGGTAGGGC TGTCAAGCTT TACCTCGTCA CGCCTTTAGT TGTCTACGCC
GCGTTGGGAG TCTATGTAGC ATTGGCCTAT CCCGTCGGTG TCTTTGACAT GGGAGTGGCA
GTGGGTGTGA TTGAGAAAAG CCTCGAACAG GTAATGCCTC CCGGGGAAGC CACGCGTCTA
GCTCCTCTGG TGGCTTATGC CCAAATCGCG CTGGCCTATG TGGCTGCTGT AACTGTCAAC
GCCCTGGCGG CCCTAGGCGA GGAACTTGGG TGGAGAGGCT ACCTCTACGA GAAGCTGGGA
GCCGCCCCAA CGTTGAGGAA TATCGTCTTG ATCGGCGTGG CATGGGGGCT TTGGCATGTC
TCTGCCACCC TGCTACTTGG CTACAGCTAT CCCGCCGAAA GGGTTGCTGG CTCTGTTCTC
TACGTGGCGA TGTGTGTGGC CTTCACTTAT CCGCACCTTG TGGCGGTCTC CACGGCGAGG
AGCGTGCTAC CTGCGGCCTC TCTCCACGGC GCTATAAATG CCCTGTGGCC TCTTACCGCG
GTGGCGAGCC CTCTGCCGGA GAGCTCGAGA GAGCTCTACG CCGGGATGGG GGTGCTGGGC
TTCGCCGCTT GGGCGGTCAT AAGCCTAGCC GTCTACGTCG TGGCTAAGCG GCGCTAG
 
Protein sequence
MVLFLALAYI FAVILDLAAA AGGAPFLAVW GVARMWSVAG AASLALLLRG EPVRASLRRW 
LSVSGRAVKL YLVTPLVVYA ALGVYVALAY PVGVFDMGVA VGVIEKSLEQ VMPPGEATRL
APLVAYAQIA LAYVAAVTVN ALAALGEELG WRGYLYEKLG AAPTLRNIVL IGVAWGLWHV
SATLLLGYSY PAERVAGSVL YVAMCVAFTY PHLVAVSTAR SVLPAASLHG AINALWPLTA
VASPLPESSR ELYAGMGVLG FAAWAVISLA VYVVAKRR