Gene Pars_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1876 
Symbol 
ID5055734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1679202 
End bp1679999 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content52% 
IMG OID640469422 
Producthypothetical protein 
Protein accessionYP_001154079 
Protein GI145592077 
COG category[S] Function unknown 
COG ID[COG2106] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTCAA TCGCAATTCC ACATGATTTT CTATCTGAAA CGCCTGACGA GCCTAGCAAG 
ATCCGCAAAT TGGGATACCT AGCCAGGGCG GCTTCTGTTT TCAAGGTAAG CACAGTCATT
ATCTACTACT ACGGCGCCCC ACTGAGGGAA GACATAGACC TCGCCAAGAC TGTTCTTGAG
TACTTGGTTA CTCCTCCCTA TCTCAGGAAA AGGGTGTATA AAATAGACAA GAGGCTGCGC
CTCGCCGGGC TTCTCCCCCC GCTAAAGATA CCCAGCCACG TTGTGCCCAA AGAGCCGCGA
ATTGGCGAAG TACGTGAGGG CGTAGTTGAG CGCTGGGACG GGTACTACTC AATAGTGTAC
ATAGGCGGCG GCAAGTATGC CAAGATCCCA AAACCGTATC CAGTGGGGGC GCGCTTATTG
GTGAGGATAG AGGCGCCAAC GTCGAGACCC GACACCTACC GGGCGGCCAT TTATAAGGGC
CCGCCGCCAG CGTACTGGGG CTATAAAGTA GAGGTTAGAC CAATACAGAG CCTTACTGAT
GGATTCGACG CTGTAATCCT AACGGGGAGA GAGGGAAAGC CGATATGCGA GGTGAGTCCA
AAGCTGGGTA AAAACACGCT CGTGGTTTTC GGAGGCCCAC GCAGGGGGGT AGACGAAATT
TTTAAAGAGT CTGGGCTTGA GCTCCCCGGC GATCTAATTA ATTTCGCGCC GGGACAAGGC
ACAGAAACTA TAAGGACTGA GGAGGCCGTC TTCATAGTCC TTTCTATTCT GAACTATATA
ACGAAGTGTC GCCTTTAG
 
Protein sequence
MFSIAIPHDF LSETPDEPSK IRKLGYLARA ASVFKVSTVI IYYYGAPLRE DIDLAKTVLE 
YLVTPPYLRK RVYKIDKRLR LAGLLPPLKI PSHVVPKEPR IGEVREGVVE RWDGYYSIVY
IGGGKYAKIP KPYPVGARLL VRIEAPTSRP DTYRAAIYKG PPPAYWGYKV EVRPIQSLTD
GFDAVILTGR EGKPICEVSP KLGKNTLVVF GGPRRGVDEI FKESGLELPG DLINFAPGQG
TETIRTEEAV FIVLSILNYI TKCRL