| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1864 |
|---|
| Symbol | |
|---|
| ID | 5055892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1666619 |
|---|
| End bp | 1667542 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640469410 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001154067 |
|---|
| Protein GI | 145592065 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.85908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCGC AGTGGCTAAT ACTCCCGGGT CTCCTCCTTT TTCTCTTCTT CAACATCTGG
CCTATTATCT ATTCAATATA CATATCATTT ACAAATGCCA ATATTAAGAA TTTCCCCCCG
CCTCCTCCGT GGGCGCCAGA GGAGCTTAAA CAAGCCAAGC CGCCTCCGGA TTTCGTAGGG
CTAGCTAACT ATGCCTCTAT TTTAACTGGC CCCGCCTCGT CGGGGTTTCT AGGAGCGGTT
TTCTGGACGC TGGTCTTCGT GGCGTTGTCA GTCCCGGCGA AGGTGGCCTT GGGCACCTTC
GTGGGACTTC TAATGTCCTC CGATAGGGTG GTGGGGAAGC CTATAATGAG GGCGTTGCTG
ATAGTGCCTT GGGCTTTGCC GCTTATTATC TCGGTGGTGG CTTGGCGGTA CGTCTTTGAC
CCCACATACG GCGTGTTAAA CCAGTTAATG TACGCTGTGG GTATATCTAA ACCACCTGAT
TGGTTTGTGA ATAAGGACTA CGCCTACGCC GCAATGGTAG TTATAGAGGC GTGGCTCGCC
TACCCCTTCA TAATGACTGT GGTAATGGGG GCGTTGGCCC ACGTCCCAAG GGCGGCGTAC
GAGGCTGCCT ATATCGACGG CGCAGGCCGA TGGGCGGTTT TCACAAGGAT CACTCTGCCG
CTTATAAAAA GGCCGCTTAT ATACGCCTCG GTCATGACTG CCGCAGCCTC TCTCCAATTC
TTCCTCGTGG CGTTCTTATG GAATTTCATA CAGCTCTACG ACAGGTTTAT GCTGGCATAC
GGCTACTACT GGGCTTTTGG GTCGCCCTTT AGGGAATATG GCTTGGCGGC CGCCGTTTTG
ACAATGTCGG CCCTGTTAAT CTCCGTGTTT ATGATACTTG CAATAAGGCT AGCGGGATTG
ATGAGGGGGA TGTATGAGAG CTAG
|
|---|
| Protein sequence | MRPQWLILPG LLLFLFFNIW PIIYSIYISF TNANIKNFPP PPPWAPEELK QAKPPPDFVG
LANYASILTG PASSGFLGAV FWTLVFVALS VPAKVALGTF VGLLMSSDRV VGKPIMRALL
IVPWALPLII SVVAWRYVFD PTYGVLNQLM YAVGISKPPD WFVNKDYAYA AMVVIEAWLA
YPFIMTVVMG ALAHVPRAAY EAAYIDGAGR WAVFTRITLP LIKRPLIYAS VMTAAASLQF
FLVAFLWNFI QLYDRFMLAY GYYWAFGSPF REYGLAAAVL TMSALLISVF MILAIRLAGL
MRGMYES
|
|---|
| |