Gene Pars_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1836 
SymbolpheT 
ID5054459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1642701 
End bp1644248 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content52% 
IMG OID640469382 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_001154039 
Protein GI145592037 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00471] phenylalanyl-tRNA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000044506 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.183571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTTA TAGACGTCGC CAAGTTTGAC TTGGAGCGAC TAACTCGCAT GAATTTCGGC 
GAGGTGATTA GGCTACTGGA GCATGTTAAA TGTGAGGTAG AGGAGGATCT GGGCGACAGG
TTGAAACTTG AAGTTACCCA CGACAGGCCA GACCACTTCT CTGCGGAAGG ACTTGCGAGG
ACTCTTAAAG GCGTCGCCGG CGTGGAGGTT GGCCTCCCCA AGATAAGGCT AGGCGCCTCT
AGTATAAGGC TAGAGGCTGG CCACATAGAG GAGAGGCCCT ACATCTCTAT GGCGGTGGTA
AGAGGCGTGA GACTAGATGA CGAGGCCGTG AGGCAATTGA TCCAGTTGCA GGAAAAGCTA
CACGAGACCT ACGGCCGGGG CAGGAGGAAG ATAGCCATTG GCTACTACGA TGTCTCCAAG
ATAAAACCCC CCATACGCTA CGTCAGAATT TCCCAAGACG ACGAGTACAC TCCTCTGGGC
TTTGATAAAC CAATAAAGGT CAGGGAGATG TACGAAGCCA CAGAACAGGG CCGGAAGTAC
AGCCACCTCA TTAACAGAGA GCGCCCGCCC GCTCTTGTGG ACTCTTTAGA TCAAATAATG
GTGGTCATAC CTGTGCTAGG GTCAGAATGT TGTAAAATTA CCGATCGCAG TAGAGACGTC
TTGATAGACG TCACGGGCAC AGACCCCAAC GCTGTCACCT CCGCGTTGTC TATCCTGATA
TATTCATTGC TTGAGAGAAG CGAGACAAGG GAGGTAGAGG TAGTAGAAGG GGGCTTGACA
TATGTCCACA GGTACGTCAC AATTAGAACA GATGAGCGAG AAGTGGGTAG CCTTCTTGGC
GTCGACATTA CCAGAGAGGA TTTCGTAAAA TACGTCGCGA TGGCGCGTTT CGGATACCAA
GAAGGAGCGG TTGTAGTCCC GCCTTATAGG CCAAATGTCT TGTCGTGGGT TGACGTGGCT
GAGGAGGTGG CCGTAATGAT GGGCTACAAC CAGTTTCCAA GAGAGGCCCC GAGAATTCAG
TCGGCAGGTA GGCGACACCG TGTGGAAATA CTTACACAGG AGGCGCGTAA AATCCTCCTA
TCGATGGGCT TCATGGAGAT GAATAACTAC ATATTAGCCG ATGAGGCGGT TGAGGAGATC
TGCAAGCCGG CGCGGGTGGC TAATCCAATA TCTGAGCTGT ACAGTGTGGT GAGGTGCTCG
ATAATAACAC AGCTTATCGC CACTGCTACT TTGGTAAAGC GGAGGGAAAT AAAGCTCTTC
GAAATAGGCG ACGTTGTGAG AGACGGAAAA ACGAGACGCG TAGCGGCGTT GTTAATAAGC
CGAGACGGCG TGACGCTCAC AGATGGGCTC TCTGCAGTGA AGGCCTTATG CCACAGGTTA
GGTCTTAACT GCCACTTCGC TGAGATGTCA ACTGCCTGGG CCCTGCCCGG CCGTGTTGCT
GAAATAAGGG GCGACGTAGA GGGTTATGTT GCGGAGACAT CGCCGGACTT GCTAGTCAAG
TTCAAATACG GGATGCCTAC AGTTGTGGCG GAGCTGTACA TTGGCTAA
 
Protein sequence
MPVIDVAKFD LERLTRMNFG EVIRLLEHVK CEVEEDLGDR LKLEVTHDRP DHFSAEGLAR 
TLKGVAGVEV GLPKIRLGAS SIRLEAGHIE ERPYISMAVV RGVRLDDEAV RQLIQLQEKL
HETYGRGRRK IAIGYYDVSK IKPPIRYVRI SQDDEYTPLG FDKPIKVREM YEATEQGRKY
SHLINRERPP ALVDSLDQIM VVIPVLGSEC CKITDRSRDV LIDVTGTDPN AVTSALSILI
YSLLERSETR EVEVVEGGLT YVHRYVTIRT DEREVGSLLG VDITREDFVK YVAMARFGYQ
EGAVVVPPYR PNVLSWVDVA EEVAVMMGYN QFPREAPRIQ SAGRRHRVEI LTQEARKILL
SMGFMEMNNY ILADEAVEEI CKPARVANPI SELYSVVRCS IITQLIATAT LVKRREIKLF
EIGDVVRDGK TRRVAALLIS RDGVTLTDGL SAVKALCHRL GLNCHFAEMS TAWALPGRVA
EIRGDVEGYV AETSPDLLVK FKYGMPTVVA ELYIG