| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1832 |
|---|
| Symbol | |
|---|
| ID | 5056225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1641245 |
|---|
| End bp | 1641649 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640469378 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | YP_001154035 |
|---|
| Protein GI | 145592033 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000112092 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.141614 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGGC CGTTGCTGGA GGAAATAGGC GAAATCCTCA GATTAGGGGA GCCTGTACGC
ACAGTTAGAC AAGCCGCAAA GGCCGTCGGC GTAGACGAGA GGAAAATCGT CAAGACGCTA
GTGGTGAAAT GCGGCGACGA ATACAGGGCG TACATCTTAC GGGGCGTTAA AAGACTAGAC
CTTGAAGCGC TAGGCTGTCG GCTGGCGACG CCGGAAGAGG TACAAAGCGT AACTGGTTAT
CAAATCGGCG GAGTGCCCCC AGTTCTGGCC ATACCTGTCT TTATAGATGA GGAGCTTCTA
GGAGAGGACT ACGTCTACGG CGGAGGCGGC GACGAATACA GCCTACTAAG ATTCAAACCC
AGAGATTTGG TGGAGAGGGG GTTCGCGAGA CCCGTGAAGC TGTGA
|
|---|
| Protein sequence | MTRPLLEEIG EILRLGEPVR TVRQAAKAVG VDERKIVKTL VVKCGDEYRA YILRGVKRLD
LEALGCRLAT PEEVQSVTGY QIGGVPPVLA IPVFIDEELL GEDYVYGGGG DEYSLLRFKP
RDLVERGFAR PVKL
|
|---|
| |