| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1819 |
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| Symbol | |
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| ID | 5056061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1632355 |
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| End bp | 1632906 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640469365 |
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| Product | tRNA-splicing endonuclease subunit alpha |
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| Protein accession | YP_001154022 |
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| Protein GI | 145592020 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.66426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAGGAG TCTTACGAGG ACTCGCCGTA GTTGTCGAAG ACGTAGAGTT TGGAAGGAGG
TTATACAAAG AGGGATTCTA TGGCCGTTTT CTTGGCTATG ACAAAGTTAA GCGTGAGGAG
GTCGACAGAA TAAATGCGCC GCTCGTGCTT GCGCTTTACG AGGCGCTTTA CCTCGTCGAG
AGGGGCGTAC TAGAGGTTGT AACCGATAGC GGGGAAAAAA TAACGCAGAC GAGGCTAGTG
GAGCTCGGCA GAGAGAAATT GAAAAATTTC GACGAGATTT ACAAAATTTA CAAGTACTTC
CGAGACTTAG GCTATGTCGT GAAAAGCGGC CTAAAATTCG GAGCACTATT CTCAGTTTAC
GAAAAAGGCC CCGGCATAGA CCACGCTCCT ATGGTTGTGG TATTTCTCGA GCCGGATAAG
GGCATATCGG CTACTGACAT CACTAGGGGA GGGCGACTAG GCCACAGCGT CAAGAAGACC
TTCACCCTGG CAACAGTGTT GAAAAATACG GGAGAGGTGA TCCTCCTCGG CTTCTCGTGG
GCTAGGCTTT AG
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| Protein sequence | MRGVLRGLAV VVEDVEFGRR LYKEGFYGRF LGYDKVKREE VDRINAPLVL ALYEALYLVE
RGVLEVVTDS GEKITQTRLV ELGREKLKNF DEIYKIYKYF RDLGYVVKSG LKFGALFSVY
EKGPGIDHAP MVVVFLEPDK GISATDITRG GRLGHSVKKT FTLATVLKNT GEVILLGFSW
ARL
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