Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1816 |
Symbol | |
ID | 5056030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1630936 |
End bp | 1631652 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640469362 |
Product | nitroreductase |
Protein accession | YP_001154019 |
Protein GI | 145592017 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.545584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATTTCT TCGAAGCGGT ACATAGGAGG CGCTCTGTGA GGAAGTTTAA GCGGGCGAAA ATCCCAGAGG AGGACATTAC GAAGATTATG GAGGCGGGTA GGGCGGCGCC GACAGATGCC ACGCTCCACC TATGGAGTGC GGTTTGGATA AGAGACGATG TGAAGAAGGC TGAGATCGCG AGGCTCATAA ATCAGCCGCA TGTAGATGAG GGGTCTGACT TCTTTGTATT TGTCGCAGAT CTATACCGCC TAAGAGAATT GCTCAAATTC AGAAACCGCG AGATGGCTAG GAACAAAATG TCGCTGTTGT TATTCGCGGC GGTCGACGCC GCGTTGGCGG CCGAGAATAT GGCCTTGGCC GCAACTGCCT TGGGCTACGG CAGTTGTTTT ATAGGCGCCG TCCAGAACGC CGTAGCAGAG CTTATCGATA TGTTAAAACT GCCTCCTCTG ACTTATCCAC TTTTTGGGCT TGTCATAGGG ATACCCGACG AGGATCCCCC ACAGCGGCCT AGACTACCTC TAGATATGCT TTTCCACAAA GAGGAGTATA GGCCATATTC CGACATTCAG CTGGGCCAAG CATATCAAAT AATGGGGAAG ATTACCAGGT CGGGAGACTG GCTAAGGCTA CTAGAGCGCT ACGCGGGTGC TGAAGGCTAT TTCAACGAGA GAGGGCAAGT CCTAGTGGAG CTCTTGAGGA AGACGGGATT TACGTAA
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Protein sequence | MDFFEAVHRR RSVRKFKRAK IPEEDITKIM EAGRAAPTDA TLHLWSAVWI RDDVKKAEIA RLINQPHVDE GSDFFVFVAD LYRLRELLKF RNREMARNKM SLLLFAAVDA ALAAENMALA ATALGYGSCF IGAVQNAVAE LIDMLKLPPL TYPLFGLVIG IPDEDPPQRP RLPLDMLFHK EEYRPYSDIQ LGQAYQIMGK ITRSGDWLRL LERYAGAEGY FNERGQVLVE LLRKTGFT
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