Gene Pars_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1816 
Symbol 
ID5056030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1630936 
End bp1631652 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content52% 
IMG OID640469362 
Productnitroreductase 
Protein accessionYP_001154019 
Protein GI145592017 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.545584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTCT TCGAAGCGGT ACATAGGAGG CGCTCTGTGA GGAAGTTTAA GCGGGCGAAA 
ATCCCAGAGG AGGACATTAC GAAGATTATG GAGGCGGGTA GGGCGGCGCC GACAGATGCC
ACGCTCCACC TATGGAGTGC GGTTTGGATA AGAGACGATG TGAAGAAGGC TGAGATCGCG
AGGCTCATAA ATCAGCCGCA TGTAGATGAG GGGTCTGACT TCTTTGTATT TGTCGCAGAT
CTATACCGCC TAAGAGAATT GCTCAAATTC AGAAACCGCG AGATGGCTAG GAACAAAATG
TCGCTGTTGT TATTCGCGGC GGTCGACGCC GCGTTGGCGG CCGAGAATAT GGCCTTGGCC
GCAACTGCCT TGGGCTACGG CAGTTGTTTT ATAGGCGCCG TCCAGAACGC CGTAGCAGAG
CTTATCGATA TGTTAAAACT GCCTCCTCTG ACTTATCCAC TTTTTGGGCT TGTCATAGGG
ATACCCGACG AGGATCCCCC ACAGCGGCCT AGACTACCTC TAGATATGCT TTTCCACAAA
GAGGAGTATA GGCCATATTC CGACATTCAG CTGGGCCAAG CATATCAAAT AATGGGGAAG
ATTACCAGGT CGGGAGACTG GCTAAGGCTA CTAGAGCGCT ACGCGGGTGC TGAAGGCTAT
TTCAACGAGA GAGGGCAAGT CCTAGTGGAG CTCTTGAGGA AGACGGGATT TACGTAA
 
Protein sequence
MDFFEAVHRR RSVRKFKRAK IPEEDITKIM EAGRAAPTDA TLHLWSAVWI RDDVKKAEIA 
RLINQPHVDE GSDFFVFVAD LYRLRELLKF RNREMARNKM SLLLFAAVDA ALAAENMALA
ATALGYGSCF IGAVQNAVAE LIDMLKLPPL TYPLFGLVIG IPDEDPPQRP RLPLDMLFHK
EEYRPYSDIQ LGQAYQIMGK ITRSGDWLRL LERYAGAEGY FNERGQVLVE LLRKTGFT