| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1814 |
|---|
| Symbol | |
|---|
| ID | 5056026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 1629242 |
|---|
| End bp | 1630540 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640469360 |
|---|
| Product | actin/actin family protein |
|---|
| Protein accession | YP_001154017 |
|---|
| Protein GI | 145592015 |
|---|
| COG category | [Z] Cytoskeleton |
|---|
| COG ID | [COG5277] Actin and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.347081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCTCCG ATGCCTATAG GCTGAAGTAC ACCTTCGGCG TAGACTACGG TACCAGCTAC
GTCAAGTACG GCCCTATCAC GCTTAATGAG CCAAGGGTTG TGCAGACCAG GGGGCTGTTC
CTAAGGGACC TCCCTGAGTC GGTCAAGATG CGGATCCCCC CCGACGTGCT GTCGAGGGGG
CTAGTGGTCG GCGACGAGGA GGTGAGGAAG TACCTCTCAA GTGTGAGGGA TGTGCAACGC
AACCTAAAGT ACCCCCTTAG AGATGGCATA GCGAAGAGAG ATGATGAGGA CGCTTGGCGC
GTGTTAAAAG AGCTCGCGAG ATTCACCTTA GGCCAGTTTC CGATATCGGA CAAGGAATTT
GAGGGGTGGA TAATCTCCAT CGCCCTCTCC GCCTTGGCCC CCGACTATAT GTATAGGGCC
TTTTTCGACA TATACACAGA GCTATCAGAC GAGTTCAAAA TATACGCAGT GACGATTTTA
CCTCAGCCCC TAGCAGTGGC TATTGCGGAA AACGCCGTTA ACTGCATAAT TGTGGAGGGG
GGTCATGGCA ATATCCAAAT TGCGCCGATT AGCTTCGCCC TTATTCGGGA GGGGCTAGTG
GCGTTGAATA GAGGAGGCGC AGAGGCCAAC GCCATCACGA GGGAGATACT GAAAGACATG
GGCTACAGCG ATATAGCCAG GGAGGAATAC GCGGTCGAGA CTGTGAAAAG GGCAGTGGGC
CTAGTCCCGA AGAACTTGAA GGAGGCGATT AAGACAGCAA AGACTAACCC TGAGAGGTTC
GTGACGAAGG TACGGCTTTC TCCAGTCGTT GAGGTGGAGT TCCCCAAGGA GTATGCGTGG
ACTAGGTTCC TCATAGGAGA GATAGTATTT GATCCAAACC ACGAGGAGAT AAGTAGCTAC
ATTGAGCAGT CCCGCTTAAC TATTGAAAAC GCCGTGATCG GCGACGTCAC GCTCTACGGT
GAGATGGACG TGGCCACTGC GGTGATTACA TCGCTTAGGA ACGTCTCCGT GGAGATACAA
GAGAGAGTTG CCTCTCAGGT AATTCTAAGC GGCGGGGCCT TCAATTGGCG CGTCCCAGCA
GGTCTTGAAG ACGTGGCCGC CGACAGCGTC ACAAGGATTA AGATCGCTCT CGAGGAGAAA
AACCCCGTTC TCGCCTCGCG AGTGAACATA AGGATGGTGT CAGAGCCCCA GTACTCCGTG
TGGAGAGGTG CGGTGATCTA CGGCTACGCC CTACCCCTAA CTCTGGAGTG GTCTGATACC
ACGAAGGAGG GGTGGATGTA CCCAAAAAAG ACTAAGTAG
|
|---|
| Protein sequence | MVSDAYRLKY TFGVDYGTSY VKYGPITLNE PRVVQTRGLF LRDLPESVKM RIPPDVLSRG
LVVGDEEVRK YLSSVRDVQR NLKYPLRDGI AKRDDEDAWR VLKELARFTL GQFPISDKEF
EGWIISIALS ALAPDYMYRA FFDIYTELSD EFKIYAVTIL PQPLAVAIAE NAVNCIIVEG
GHGNIQIAPI SFALIREGLV ALNRGGAEAN AITREILKDM GYSDIAREEY AVETVKRAVG
LVPKNLKEAI KTAKTNPERF VTKVRLSPVV EVEFPKEYAW TRFLIGEIVF DPNHEEISSY
IEQSRLTIEN AVIGDVTLYG EMDVATAVIT SLRNVSVEIQ ERVASQVILS GGAFNWRVPA
GLEDVAADSV TRIKIALEEK NPVLASRVNI RMVSEPQYSV WRGAVIYGYA LPLTLEWSDT
TKEGWMYPKK TK
|
|---|
| |