Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1811 |
Symbol | |
ID | 5056001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1626100 |
End bp | 1628484 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640469357 |
Product | SMC domain-containing protein |
Protein accession | YP_001154014 |
Protein GI | 145592012 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.305534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAGGA TAGAGAGGAT TGAGCTGGAA AACTTCCGCT CCTACAAGGG GAGGCATGTT GTGAGCCTAG GCGATGTGAA CATACTGTGG GGGAGAATAG GGGCTGGTAA GACATCTCTC CTATACGCAG TTGAGTACGC CCTCTACGGG AGGCAATTGG AGGTCAAGGA AAGAGTCGCC AAGTTGCTAG ACCTAATCAA CGTCGAAGCT CACGAGATGC GAGTCTCCCT CGTCCTAAGC GATGGTGGGA GATTGCTCGA GATAGAAAGG CGCCTAGGGA GGCGCGGCGA CGAAAAGATA GTGGTGAGAA TCAACGGGGA AGAGCTCCGG GGGAGAGAGG CGGAAAGGAG GCTGGAGGAG CTGTTAGGCG CCGACGAGGA TATCTACGAA AGACTCATCT ACATATCGCA TAGGACCCTA GAGGGCTTTA TCTACGGCAC TTCGCAGAAG AGGTCGCTAA CAGTAGATAG GCTCTTCGGT ATCGATGTGA TAGATAGCGT TGTCCGGGTT GTTTCGTCTG TTGAGAAGTC CCTTTTGGCC AAGGCCGAGG AACTAAGGGG GAGGCTTGCG GCGTATGAGA AGTATAAGGA GGTGATCAGA AGATACGGCG GTTTCGCCAG CGTCAAGAAG CGCCTAGAAG ACTTAACAAA AGAGGTAGAA ACCCTGAAGG AGAGGGAAGC GGCGCTGTCT AGAGACGCAG AGGACTTAGC AAGAAAAAGA GCGGAGCACT TAGCCAAGCT GAGGGAGCAC GAGTCTATGC TCCTTGAGTA CTACAAGACA AGATCGGAAC TAGAGGTTTT AGAAAGCGCT ACAGAGGGGG GGACTTTTGA CCAGTCAACA GTGGAGAGGC TGAGAGATGC GCTCAGAGAA GCCGTAGAGG AATTTGAACA TGTCGTGGGC GAGGAGCTTG CCGAGAAGCT CTCAAAAGCC GGCGATGTGG AGTCGCTGTC TATTGCCATG ATGGAGGCGT ACAACGCCTT GTCGAGGTTG CAAAACGAAC TAGAAGCGCA GATTGCAGAA GCGAAAAAAC TCTACGAACA ATACTCGGCA AGAGTTAGGA AAATTGATGA GGAGATAGCC GAGGCACGGG AAAGGCTAAA AAGACTTGAG AAGTACTACG CTCGTTTCAA GGAGTTACAG AAGACTATCC AGTCAGTGGA TTCGGCTCGC GCCTCGCTGG CGGAGCTTAG AAGACAGATT CAGACGTTGG AAAGAGAGGT TTCTTACTCC TCCGCGTTGA GAGTAGTGGC GCTCTACGCC GCGGAGACTG GGGCAGAAAA GTGCCCCATA TGCGGCGCTC CTGTGCGGAA AGAGGATCTC CTTCGCCGTG TGGAGGAGGT GGAGGCTAGA CACGGAACTC TCATCAAGGA GGTGGAGGAG CTGAAGGAGA GGGCTTCTCA GCTGGAAAAA GCCGTGGAAG AGGCGGAGGC GCTAAGCGGC GAGGTCGCGG AGTATCTAGC CGTGAAGACT AGATTAGAGG AGCTTGAAAC CGAGAGGGAA GAGGCAGCAA AGAAGGCGTT GCAAGCAGAG AAATCCTGGA AACAGCTTGA GAAGAAGACA GAAAGACTAC GCTTGTTGCT GGCTAGAGTT GATAGAAGAA CTATATCCGA TACCCTCGCC AAGTATGGAA GGGCTGTAAG GATTAGAGAG TTGCGTAAGC GTTTAAGAGA AATCGAGGAC TCGTTGAAAA AGATCGGGAT CACGAGCGAT GTCATAAACA TTGATGTAAA CTGGAGAGAG GTCGTAGAGG AGCTTGAAAA AACCTCGCGC AAACTCGCCG AGGCATATAG AGAGAAAGCC CTCCTAGAAG AAGTTGTGAG AGAAGTCGGC GAAGACGCCG AGGCGTTAAA AAAGAAACTG GACAACACCC TGTACGCCTA TGGCAAGTTG CAGGAGGTTA AGGCTAAGCT GGAGCTTGCC AAGATCAACG CGAGGGCGCG GCTCCTTGAG GTGGCTAGGA GCAGATTCAA CGAGGTATTC ACCTCTCTGT ACAGATATGG CGACATCGTA AGGGTTGATG CCGACTTAGA ACAGCGCAGA GGCTTCTACG ACTTCCACGC CATAACTCCC ACCGGGGATA GATATGGAAT CTCTAAGCTC AGCGACGGTC AGCGACTCTC CATAGCCCTT GCCCTCGCGC TGGCGCTCCG GGACATCGCA AGAATAAACT TGGGATTTGT AATCTTCGAC GAGCCGATCC CCTACGTGGA TGTGAACATA AGAAGAGCCT TTGCCGAAGT GGTCAAGGCG CTGGCGAGCC GTTTCCAGAT AGTTGTCGCT ACCCAGTCGA GGGAATTCGC GGAGATGATA AAAGAAGCGG TTCCCAACGC GCTCCTCTTC AAGGTGGATA AAAAAGAGAG CTCCGAGGCA GTAGTGGAGT CCTAG
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Protein sequence | MWRIERIELE NFRSYKGRHV VSLGDVNILW GRIGAGKTSL LYAVEYALYG RQLEVKERVA KLLDLINVEA HEMRVSLVLS DGGRLLEIER RLGRRGDEKI VVRINGEELR GREAERRLEE LLGADEDIYE RLIYISHRTL EGFIYGTSQK RSLTVDRLFG IDVIDSVVRV VSSVEKSLLA KAEELRGRLA AYEKYKEVIR RYGGFASVKK RLEDLTKEVE TLKEREAALS RDAEDLARKR AEHLAKLREH ESMLLEYYKT RSELEVLESA TEGGTFDQST VERLRDALRE AVEEFEHVVG EELAEKLSKA GDVESLSIAM MEAYNALSRL QNELEAQIAE AKKLYEQYSA RVRKIDEEIA EARERLKRLE KYYARFKELQ KTIQSVDSAR ASLAELRRQI QTLEREVSYS SALRVVALYA AETGAEKCPI CGAPVRKEDL LRRVEEVEAR HGTLIKEVEE LKERASQLEK AVEEAEALSG EVAEYLAVKT RLEELETERE EAAKKALQAE KSWKQLEKKT ERLRLLLARV DRRTISDTLA KYGRAVRIRE LRKRLREIED SLKKIGITSD VINIDVNWRE VVEELEKTSR KLAEAYREKA LLEEVVREVG EDAEALKKKL DNTLYAYGKL QEVKAKLELA KINARARLLE VARSRFNEVF TSLYRYGDIV RVDADLEQRR GFYDFHAITP TGDRYGISKL SDGQRLSIAL ALALALRDIA RINLGFVIFD EPIPYVDVNI RRAFAEVVKA LASRFQIVVA TQSREFAEMI KEAVPNALLF KVDKKESSEA VVES
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