Gene Pars_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1802 
Symbol 
ID5055855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1617861 
End bp1618424 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content49% 
IMG OID640469347 
Producthypothetical protein 
Protein accessionYP_001154005 
Protein GI145592003 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0727976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAG TAGCAAGACT GGTAGGGTGG ATAATAGCAT ACGTAGTGGT GATGGCCGCC 
ATCCAATTCC TATTTAGCTA TGTAGCTAAT ATTTATAAAC AGATAATGGA CTACAAGATC
TACGTAGACA TATTGCTCTC CCTGTTCTTT GGCTGGCAGA TCGTTAAGGC GTTTGCGGAC
ATAATAGCGT TGCCGGTGGC TAAGAAGCAA GGTGAAACTG CGGGCAAGGC CGTGTCTAAC
CTAGTCAAGC TGATAGGCAT TGGCGCGCTG GTGGCATCAA TAGCCGGCGC AGTATCCGGA
GGCCCCGCCG CGGCGGCGCT TGGCGGCTTC ATAGGCCTAG TAATCGGCTT CGCCACACAG
CAAGTACTAG GCCAGGCAGT AGCTGGGACT TTCCTCTTGC TAGCTAGGCC CTTCAAAATA
GGTGACAAAA TAGTGGGCGC AGGTCAAGAA GGCGTAGTAG AGGACATCAA TGCCATGTTT
ACAGTTCTCA GAGACGCTGA GGGAAACAAA ATACTAGTAC CTAATAACAA GCTTGTAGGG
GACATATTAA AAATCAAGAA ATAG
 
Protein sequence
MNPVARLVGW IIAYVVVMAA IQFLFSYVAN IYKQIMDYKI YVDILLSLFF GWQIVKAFAD 
IIALPVAKKQ GETAGKAVSN LVKLIGIGAL VASIAGAVSG GPAAAALGGF IGLVIGFATQ
QVLGQAVAGT FLLLARPFKI GDKIVGAGQE GVVEDINAMF TVLRDAEGNK ILVPNNKLVG
DILKIKK