Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1802 |
Symbol | |
ID | 5055855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1617861 |
End bp | 1618424 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640469347 |
Product | hypothetical protein |
Protein accession | YP_001154005 |
Protein GI | 145592003 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0727976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCAG TAGCAAGACT GGTAGGGTGG ATAATAGCAT ACGTAGTGGT GATGGCCGCC ATCCAATTCC TATTTAGCTA TGTAGCTAAT ATTTATAAAC AGATAATGGA CTACAAGATC TACGTAGACA TATTGCTCTC CCTGTTCTTT GGCTGGCAGA TCGTTAAGGC GTTTGCGGAC ATAATAGCGT TGCCGGTGGC TAAGAAGCAA GGTGAAACTG CGGGCAAGGC CGTGTCTAAC CTAGTCAAGC TGATAGGCAT TGGCGCGCTG GTGGCATCAA TAGCCGGCGC AGTATCCGGA GGCCCCGCCG CGGCGGCGCT TGGCGGCTTC ATAGGCCTAG TAATCGGCTT CGCCACACAG CAAGTACTAG GCCAGGCAGT AGCTGGGACT TTCCTCTTGC TAGCTAGGCC CTTCAAAATA GGTGACAAAA TAGTGGGCGC AGGTCAAGAA GGCGTAGTAG AGGACATCAA TGCCATGTTT ACAGTTCTCA GAGACGCTGA GGGAAACAAA ATACTAGTAC CTAATAACAA GCTTGTAGGG GACATATTAA AAATCAAGAA ATAG
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Protein sequence | MNPVARLVGW IIAYVVVMAA IQFLFSYVAN IYKQIMDYKI YVDILLSLFF GWQIVKAFAD IIALPVAKKQ GETAGKAVSN LVKLIGIGAL VASIAGAVSG GPAAAALGGF IGLVIGFATQ QVLGQAVAGT FLLLARPFKI GDKIVGAGQE GVVEDINAMF TVLRDAEGNK ILVPNNKLVG DILKIKK
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