Gene Pars_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1796 
Symbol 
ID5055732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1612987 
End bp1613649 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content48% 
IMG OID640469341 
Productphosphoribosyltransferase 
Protein accessionYP_001153999 
Protein GI145591997 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.129569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAAGA TTCCTGTTAA GGTAGTTACG TTTGAAGAAA TAGTAGAGTG GTCAAGGGCG 
CTTGCTGAGA GGATTAGGGA AAGCGGTTGG CAACCTGATG TGATAGTTGC CATAGCCCGC
GGCGGCTACA TCCCAGCGAG GCTTTTGTGC GACTGGCTCG GCGTCAGCGA TCTCGTCAGT
ATACAAGTGG TGCACTGGCC CACGGCGGCG CAGATGGCTG AGAAGGCCTA TGTGAAATAC
CCTGTAAGTG TAGACCTAAG CGGCAAAAAG GTATTGGTAG TCGACGACAT TGTAGATACT
GGAGACAGCG TAGAGCTGGC AAAAAAGAGT GTTGAGGAGT GTTGTAAACC AGCGGAGGTA
AGAACTGCAA CTCTACAAGT CATAACCCCC GTAGCTAAGT ACATTCCCAA CTACTACGCA
ATCGAGGTGA AGGAATGGAT ATGGTTCGCC TATCCGTGGA ACGCCGTAGA GGATGCCGTT
GGATTTGTGA TGAAAATTGT TAAAGAAACC GGTAAAACTA CGTGGTGCCT TGACGAGTTG
ATCCACGCCC ATATAGAGTG GTACGGTCGA GAGTATATAG AAAAGAGGTT TGGCTACATA
CTCTACGCTG TCGATTTGAT GGGAAAAAGA GGGCTTATAA AACTCAACAA ATGTACATCC
TAG
 
Protein sequence
MPKIPVKVVT FEEIVEWSRA LAERIRESGW QPDVIVAIAR GGYIPARLLC DWLGVSDLVS 
IQVVHWPTAA QMAEKAYVKY PVSVDLSGKK VLVVDDIVDT GDSVELAKKS VEECCKPAEV
RTATLQVITP VAKYIPNYYA IEVKEWIWFA YPWNAVEDAV GFVMKIVKET GKTTWCLDEL
IHAHIEWYGR EYIEKRFGYI LYAVDLMGKR GLIKLNKCTS