| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1790 |
|---|
| Symbol | |
|---|
| ID | 5055689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 1609478 |
|---|
| End bp | 1609954 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640469335 |
|---|
| Product | 30S ribosomal protein S19e |
|---|
| Protein accession | YP_001153993 |
|---|
| Protein GI | 145591991 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2238] Ribosomal protein S19E (S16A) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0495408 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCGG TCAAGGACGT GCCCGCGGAT TTGCTAATAG GCGAGCTGGC GAGGTACATA
AAGGAAAATG TGCCTCAGGT AAAGCCACCT GTGTGGGCCC CCTTTGTGAA AACTGGAGCA
AATAAAGAGA GGCCGCCTGA TACTCCAGAC TGGTGGTACA TAAGGGCGGC GTCTATTATC
AGAAAGCTGT ACCTATACGG GCCCGTCGGG GTTGGAAGTC TGCGCACGGC TTATGGCTAC
AGAGCTAAGA TTGGCGATAA GACGAGGCCT GAGAGGACTC GGAAGGCCGG CGGGGCCGTA
ATAAGGAAAA TTCTCCAGCA ACTAGAGCAG GCCGGCTTCG TAGCCAAGAC GAAGAAAGGG
AGGGTTTTAA CCCCGGAGGG GAGGTCACTT GTAGATCGAA TAGTGGCTAA AATCGCAAAG
GAGCTCGTGA AGACAAGGCC GGAGTTAGCC AAATATCTAG CCCCGCCCAA AGAGTAA
|
|---|
| Protein sequence | MPSVKDVPAD LLIGELARYI KENVPQVKPP VWAPFVKTGA NKERPPDTPD WWYIRAASII
RKLYLYGPVG VGSLRTAYGY RAKIGDKTRP ERTRKAGGAV IRKILQQLEQ AGFVAKTKKG
RVLTPEGRSL VDRIVAKIAK ELVKTRPELA KYLAPPKE
|
|---|
| |