Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1781 |
Symbol | |
ID | 5055542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1602668 |
End bp | 1605001 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640469326 |
Product | oligosaccharyl transferase, STT3 subunit |
Protein accession | YP_001153984 |
Protein GI | 145591982 |
COG category | [R] General function prediction only |
COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0356227 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGGA GGGAGAAGCT TCTGGTTACG GTTCCGGCCC TTATTGCCGC CTTCGCTATT GCGCTATACA TGAGGATGTA TAGAGTTTTT GCATGGGGAT GGTGGCTTGA CGAGTTTGAC CCCTATATCC GCTACTATTT GGCCAAGTAC ACACTTGAGC ACGGGCCTGG CTGGTGGTGG AGCGGCGCCC ACTTTACGCA GTTCTGGTAC CCCTTCGGCG TAGATTGGGG AAAAGTCCTT CTGCCCGGTA CCTCGTTCTA TGGGCTTTTC ACGTACTTTC TCCTGAGTCC TTTCGGAGTT GACCTATGGC ACGCGGTTAT CGCCGCGCCG GCTATCATGA ACGCCTTGGC TGTATTCTCC ATGTTTTACC TTGGCTACAG GATAGGGGAG GAGCTGGGTA TTCCAAATGG CGGGCTGAGA GTAGGCCTCG CCGCGTCGCT CCTTGTCGCC ATAATGCCGG CTTACATAGA GCGAGGCTCT GCTACGTGGT TTGATGACGA GCCGATTAGC CTGTTCCTAA TACCCCTCGG CCTCGCGCTG TTGATAGACG GTTTGAGGCG GCCGTGGTTG GGGGCGGCGG CGGGGGCCGC CTTGGGCTAC ATCGCATGGA CTTGGGGAGC TCACTTCTAT ATCTGGAACT TAGTGGGCCT ATACGCCGTT GTCCTCCCAA CTTACTACTT CCTAAAACTT GCCTTTGCGA GAAGCGAGAG GCCCTCAAAG GTTGGAAAGC GGCAGCCGGC TCCCCAGCCG CTGAGCCTCC CCTTCAACAC AAGAAACTTC TTCGTATCCT ATGCTCTGTT CTACGTGGTC TACGCCGCGT TCGTGGCTAC TATCCCCCGC TACGGGGTCA GCAGTTTGCT GAGCGCATTT AATATCTTGC CCACCTTCGG CCTATTCGTC GCTCTTGCCA CCTGGCTCTT GGACTCAAGG CTAGGCGTAA CCCGAACAAC GCAGATGCTG AGAAGGTACG TATGGTTGCT CGTGGGCGCT GCGGCTCTGG GCATAGTCTT GTTGTTAGTG GCCATAGCCA CTGGGCAAAT AGGCGGCAAG TTCTTGGCCA CTCTTCTCCC AGTTGGGCGC TCAGCGATTG TAGCAAGCGT CGCCGAGCAC AGCACTACCC AATTTATCCA GGTCCTCATT AGATACGGCC CCATCCTGCC CTTCATAGTA GTCTCTATTC CCCACCTCTT TGCCACTGGC GGCCTAATGG CGTTGACGTA TTTAGTAACC GGGGGATACG CCTCGGCCAC TATGGTGCGT CTTTTGGTGT TGCTGGCGCC GGTGGCAGCA GTGACGGCAG CTGTGGGAAT AGTTAAGTTA GTAAATAATA GAAGGCTTGG CTATCTTGCC CTACTTGCAT CGGCTATCTC GCTTATCATA CTTACAAACT CATCGTTTGG GATCGCCTCG CAACCAACCC AGATCGTCAC TTCAGCTGTA GGCGCAGTAA GCGACGACTT TCTCGACGCG TTAATGTGGC TTAAGACTAG GCTACCTGCC TACGAGCCTG TGGCGTCTTG GTGGGACTAC GGCTACTGGA TATCCATAAT TGGGAATAAG ACAAGCCTGG CGGACAACTC TACTATCAAC GCCACCCAGA TCGGGATGAT CGGTCTCGGC ATGATGGCGC CGCCGCAGAT CGGCACTAAA ATATTCGCCG ACAACTTCCA TACCAAGTAC ATACTGGCCA TAATGCCCTA CGCCGTGTAT CCCATAAACC TGCAACAGTA TGGGACCGTC CCTGTGCTCG TACACGAATA TCCCCCCGGC GGCGACTTTC TCAAATCGTA CTGGATGACG AGGATAGCTC TTGAAAACGT GGCGGCGGCT AGGGCTATTT TAGGCGCGCC GGCTGGAGTC TCCGCAGACG ACTTTATATA TACAAGGGTC ATGTCTTACC CCGGCCCCCC GCCGGCTAAC TACGCCTACT TCACCATAGG CCAGAGCTAT TATCCTGTAC CCATTAGCCT AAACAGGACT CTATACACAA TGCTGTTCTC CAAGGTGAGG TTGTTCCCAA TCTACGGCAA CGATTCACAG TACCTTTCCT GGATTTTTGA GGGGGTACAC ACTGGTGTTG GTTTCACCTC GTTTAGAAGC CTAAAATTAG TTGGAGGCAA CGTCTATCTC CCTGTAGATC TGACCCAGAA ACTCCAGGGC ATCGCGACCT ACGTCATGCA AGGCTGGACA CAGGGCGGTG TCGACGTGGT TGTAGATCCG CTGACCGGCA AGACGGAGCG CATACCCTAT ATCACAGTGG TGCCCCAGAA TCTGAGGCCT GTCTACGTCT CGAAGCCCTA CGGCTGGGTT GTTATATACC AGGTATCGTC GTAA
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Protein sequence | MDRREKLLVT VPALIAAFAI ALYMRMYRVF AWGWWLDEFD PYIRYYLAKY TLEHGPGWWW SGAHFTQFWY PFGVDWGKVL LPGTSFYGLF TYFLLSPFGV DLWHAVIAAP AIMNALAVFS MFYLGYRIGE ELGIPNGGLR VGLAASLLVA IMPAYIERGS ATWFDDEPIS LFLIPLGLAL LIDGLRRPWL GAAAGAALGY IAWTWGAHFY IWNLVGLYAV VLPTYYFLKL AFARSERPSK VGKRQPAPQP LSLPFNTRNF FVSYALFYVV YAAFVATIPR YGVSSLLSAF NILPTFGLFV ALATWLLDSR LGVTRTTQML RRYVWLLVGA AALGIVLLLV AIATGQIGGK FLATLLPVGR SAIVASVAEH STTQFIQVLI RYGPILPFIV VSIPHLFATG GLMALTYLVT GGYASATMVR LLVLLAPVAA VTAAVGIVKL VNNRRLGYLA LLASAISLII LTNSSFGIAS QPTQIVTSAV GAVSDDFLDA LMWLKTRLPA YEPVASWWDY GYWISIIGNK TSLADNSTIN ATQIGMIGLG MMAPPQIGTK IFADNFHTKY ILAIMPYAVY PINLQQYGTV PVLVHEYPPG GDFLKSYWMT RIALENVAAA RAILGAPAGV SADDFIYTRV MSYPGPPPAN YAYFTIGQSY YPVPISLNRT LYTMLFSKVR LFPIYGNDSQ YLSWIFEGVH TGVGFTSFRS LKLVGGNVYL PVDLTQKLQG IATYVMQGWT QGGVDVVVDP LTGKTERIPY ITVVPQNLRP VYVSKPYGWV VIYQVSS
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