Gene Pars_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1770 
Symbol 
ID5055369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1590489 
End bp1590962 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content50% 
IMG OID640469315 
Producthypothetical protein 
Protein accessionYP_001153973 
Protein GI145591971 
COG category[S] Function unknown 
COG ID[COG1901] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00657507 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGGCGTT TCTTAATAGC GACGTCGTTG TCGAGATTCC AAGCAGAACC TCACGTCCAC 
GCTAAAATCT TGGTCGGAGC CTTGCTCATA TCAAACGGAG TAAGACAGGA TGTGGAGGTG
ATCTATTACC TCACCGATGT TAAAAAGACG GTAAAGATTA TCGGCGGAAG AGTAAAGAGG
CTTTTCCCAG ACGAGCAATC TGCAATAGGC TTTCTAAAAA AAGCCCTAGT AGCCGGGGGG
CAGACTGGGG TGGTAACGAG GAAAGGGACG CCGGAAAGGG AAGGGATAGT AATGGGACCG
GTAAGTGGAC CGCCCTGCCT CCCCAAACCG CCCTATACTT ACGTGTTAGA ACTAGAAAAA
GTGGGGTTTG AAATTGACTG CGGCATGGGC CTGGCGGCGT TGCCACCTCA TCATCAAGTA
GTAGTTGTTA ACGTCACGAC TGATAGATTG CTGAGCGGTA GAAGGACTTT TTAA
 
Protein sequence
MRRFLIATSL SRFQAEPHVH AKILVGALLI SNGVRQDVEV IYYLTDVKKT VKIIGGRVKR 
LFPDEQSAIG FLKKALVAGG QTGVVTRKGT PEREGIVMGP VSGPPCLPKP PYTYVLELEK
VGFEIDCGMG LAALPPHHQV VVVNVTTDRL LSGRRTF