Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1769 |
Symbol | |
ID | 5055367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1589191 |
End bp | 1590492 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640469314 |
Product | GTP-binding signal recognition particle |
Protein accession | YP_001153972 |
Protein GI | 145591970 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0023858 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGGCAC TTACTGAGCT GTTCAGCAAG CTAGTAGAGA AGATCAGAGA CGTCGAGTAC ATAGACGAGG CAACCTTACA AGAAATAGCG CGGGAAATAC AAAGGACATT ACTAAAGGCA GACGTCCCGC TCGATCTTGT TAAGACCTTT ACCGATAACG CGGTAAAGAG GATAAGGGAG GAGAAGCCGC CGGCCGGCAT ACCGCCGAGA GAATACCTAA TCTACGTGCT CTACGAGGAG TTGGTAAAGC TAATGGGCGG CGAGCAACCG GCCGAGTTCA AGCCGACAAA GAAGCCCTAC ATCGTATTGT TACTTGGCGT AGAGGGTAGC GGTAAGACCA CCACTTCGGC GAAGCTGGCG AGATACCTAA TGAAGAGGGG CTACAAGGTC GGCATGGTGG AGACCGACAC CATTAGACCA GCGGCGTTTG ATCAGCTTAG GCAACTAGCT GAAAAGATAG GAGCCCCCTT CTACGGCGAA AGGGATGGAA AAGACGCCGT AGAGATAGCT AGGCGCGGAG TCGCCAACTT AAAGGGGGTT GACGTATTGA TAATAGACAC AGCAGGCAGG CACAGAAATG AAGAGGCGCT ACTCCAAGAA GTCAAGGCTA TATACGACGC GGTGAACCCC GACGAGGTGG TGCTCGTGGT AGACGCCACT GTGGGTAAGC TCGCTGCGGC ACAGGCAGAG GCCTTTATGA AATATCTCCC AATACACACA GTTATCATTA CTAAAATGGA CAGCACAGCC CGCGGAGGCG GAGCACTGGC GGCTGTAGCC AAGACTGGTG CCCGGGTAAA ATTCATAGGG GTGGGGGAGG ACGTAGAGGA GCTGGAGCCC TTTAACCCCC GGAAGTTCGT AGCCAGGTTG CTAGGCATGG GCGACCTAGA CGCGTTGTTG GAAAAAATCA AGGCGGTGTT CGAAGAGGAA GAGGTGCTAG AAGAAATCGA GAGCGGGAGG CTAGACCTTC TCACCTTCAA GAAGCAGATC GACAGCTTGA TGAAGTTGGG GCCCCTCAGT AAGGTTTTTC AGCTACTGCC TGGAGGATTA GCAGCTAAGA TATCCGAAGA GCAGATAGAG CTGTCGCAGA AAAATCTGAA AAAGTGGCGT GCTATACTGA GCTCAATGAC TATGGAAGAG TTGAAAAACC CTGATATTTT AAACGCGTCA AGGATCCGCC GCATAGCGCT GGGAGCCGGC GTTACGCCGA AAGACGTAAA GGAGATGCTG ACTGTTTACG AAAACTTGAA GAAAATGTCT AAGACGTTGA AGCGCCAGAT GAGGCTTAGG ATGGCCAGGT GA
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Protein sequence | MKALTELFSK LVEKIRDVEY IDEATLQEIA REIQRTLLKA DVPLDLVKTF TDNAVKRIRE EKPPAGIPPR EYLIYVLYEE LVKLMGGEQP AEFKPTKKPY IVLLLGVEGS GKTTTSAKLA RYLMKRGYKV GMVETDTIRP AAFDQLRQLA EKIGAPFYGE RDGKDAVEIA RRGVANLKGV DVLIIDTAGR HRNEEALLQE VKAIYDAVNP DEVVLVVDAT VGKLAAAQAE AFMKYLPIHT VIITKMDSTA RGGGALAAVA KTGARVKFIG VGEDVEELEP FNPRKFVARL LGMGDLDALL EKIKAVFEEE EVLEEIESGR LDLLTFKKQI DSLMKLGPLS KVFQLLPGGL AAKISEEQIE LSQKNLKKWR AILSSMTMEE LKNPDILNAS RIRRIALGAG VTPKDVKEML TVYENLKKMS KTLKRQMRLR MAR
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