| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1762 |
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| Symbol | |
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| ID | 5055280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1580401 |
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| End bp | 1581750 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640469305 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001153965 |
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| Protein GI | 145591963 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.304418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000873526 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTCCA AAACACTGTA TATAGGACTA GCAATAGCAG TAGTATTAAT AGTAGTAGTT
GCGGTACTTC TATCCCAAGG CGGTGGGCAA ACAACTCCCA CGCAGCCACC CAAACAATCG
CCAACAGTAA CAACCTCTAC CCCTGGCGGT GGGCAAACGA CCTCTACACA GCAAACTACG
CCAACTCAAG CGGTTAAAAC TGTGTATATA GGCGCCGCCC TTCCGCTGAC CGGCGGCTTG
CAGTCTTATG GTGTTGGTGT GAAGAACGCT GTGGAGATGG CTGTGGAGGA TGCTAATAAG
ATGTGTGGGG GGAAGGTTAA GTTTGAGCTT CTGGTGGAGG ATACCGGTAC AAGCCCGACG
CAAGCTTTGC AGAAGGTGCA GACGCTGTAT TCCAAGGGCG CTAGGCTAAT CGTAGGCCCA
ATGGCAAGCG GCGAGGTCAG TGCCAGTAAG TCTTTTGCAG ACCAGAACCA CGTGATTATC
TTCTCGCCTT CCTCTACGTC TCCGCTTTTG GCTATACCCA ACGACTGGGT ATACAGAATC
GTGCCGACAG ACTTCGCCCA AGCCGCCGCC ATAGCCGCGC TGATGCAGAA GCTGGGCATT
AAAAAGGCCG TCATCCTCTA CCGCAACGAC GCCTGGGGGG TAGGCCTCAA AGACGCAATA
ACCAACGAGT CTAAGAAGCT GGGAATACAG ATAGCCGCCG CGGAGGGCTA CGACCCAGAC
CCCAAGGCCT TCCCCACCGC GGTGCCCCAA GCAGTGAACA AACTATCCAG CGCCTTAGGC
CAACCCAGCC CCGACGTCGC TTTGATACTA GTAACCTTTG AGGACGATGG CCTTGTGGCT
GTTCAATCCG CCGCAGGCGA CCCGGTGTTG GGGAGGATTA GGTGGATTAG TACAGACGGC
ATTGCTTACA GCGACGCGTT GATTAAGCAG GTGGGTAAAG AGATGGCGGC GGCGAAGATG
TTGGGCACAA TTGCCGGGCC GAACCCCGCC GATCCGAAGT ACCAGGAGTT TAAGCAGAGG
TACAAGGCCA AGTACGGCAA GGACCCAGTG GCCTACGACC CCTACGGCTA CGACGCCGCC
ATGTTGCTAA TGCAGATCGT CTGCCAGCTG GGGACAGAGG ACCCAGACAA GGTGCGCGCA
ACGCTTGAGC AGTGGGGCAG AGACGGCACC TACCAAGGCG TCACCGGGAG AGTATACCTA
GACGCCGCCG GCGACAGGGC ATACCCCAAC TACATCATAT GGGGCGTAGT AACCGAGGGC
GGACAGCCAA AATACGTAGA CGCCGCCTAC TACTATGGCG CAGACAAGAA AATAGAGGTA
TACGACGCAG GCAAGCCACT ATTCCAATAG
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| Protein sequence | MASKTLYIGL AIAVVLIVVV AVLLSQGGGQ TTPTQPPKQS PTVTTSTPGG GQTTSTQQTT
PTQAVKTVYI GAALPLTGGL QSYGVGVKNA VEMAVEDANK MCGGKVKFEL LVEDTGTSPT
QALQKVQTLY SKGARLIVGP MASGEVSASK SFADQNHVII FSPSSTSPLL AIPNDWVYRI
VPTDFAQAAA IAALMQKLGI KKAVILYRND AWGVGLKDAI TNESKKLGIQ IAAAEGYDPD
PKAFPTAVPQ AVNKLSSALG QPSPDVALIL VTFEDDGLVA VQSAAGDPVL GRIRWISTDG
IAYSDALIKQ VGKEMAAAKM LGTIAGPNPA DPKYQEFKQR YKAKYGKDPV AYDPYGYDAA
MLLMQIVCQL GTEDPDKVRA TLEQWGRDGT YQGVTGRVYL DAAGDRAYPN YIIWGVVTEG
GQPKYVDAAY YYGADKKIEV YDAGKPLFQ
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