| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1757 |
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| Symbol | rps28e |
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| ID | 5055243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 1577340 |
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| End bp | 1577573 |
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| Gene Length | 234 bp |
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| Protein Length | 77 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640469300 |
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| Product | 30S ribosomal protein S28e |
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| Protein accession | YP_001153960 |
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| Protein GI | 145591958 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2053] Ribosomal protein S28E/S33 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0124753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00253054 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCGAAG AGGTTAAATT CTCGCCTTAC GAAGACGCAG TTGCCGGAAT AGTTATACAA
ATACTAGGCA GAACCGGGAT AGCGGGGGAA GTCACACAGG TAAAGGTCAA AATATTAGAA
GGCAGAGACA AGGGGCGCGT ATTAACGCGG AACATCAAAG GGCCTGTGAG GCTGGGAGAC
ATTGTAATGC TTAGGGAAAC AGAAAGAGAG GCGAGAAGAA TCTCGGCAAG ATGA
|
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| Protein sequence | MAEEVKFSPY EDAVAGIVIQ ILGRTGIAGE VTQVKVKILE GRDKGRVLTR NIKGPVRLGD
IVMLRETERE ARRISAR
|
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