Gene Pars_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1754 
Symbol 
ID5055148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1574211 
End bp1574573 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content45% 
IMG OID640469297 
Producttranslation initiation factor SUI1 
Protein accessionYP_001153957 
Protein GI145591955 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000113267 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00210388 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGATAA AACTCCCAGG TCAGGACGCC GAAGATATCA TTGACCAACT ATTAGGCAAT 
ACTCAGGAAG AGGCGTTGAT GCAGACAATA ACAAAAGAAA AGGCACTTGT AAGAATTAGG
CTGGAAAACA GACGGGGGCA CTACGTGACT ATTGTCGATT TTGGCAATTC TGAAGACGCA
AAGCAACTCG GCATTAAGGA CATGGCGCGT GAGTTGAAAA AGAAACTCGC CGCCGGCGGT
ACTATTCGGG ACAGTTGGAT AGAGATACAA GGGGACCATA GGCAGAAGAT AAAGAAGTTA
TTAATAGAAA TGGGGTTCAA GGAGGAGAAT ATCCTCATAG ATGAGGGAGT TACCGAGGCA
TAG
 
Protein sequence
MEIKLPGQDA EDIIDQLLGN TQEEALMQTI TKEKALVRIR LENRRGHYVT IVDFGNSEDA 
KQLGIKDMAR ELKKKLAAGG TIRDSWIEIQ GDHRQKIKKL LIEMGFKEEN ILIDEGVTEA