Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1754 |
Symbol | |
ID | 5055148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1574211 |
End bp | 1574573 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640469297 |
Product | translation initiation factor SUI1 |
Protein accession | YP_001153957 |
Protein GI | 145591955 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000113267 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00210388 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGATAA AACTCCCAGG TCAGGACGCC GAAGATATCA TTGACCAACT ATTAGGCAAT ACTCAGGAAG AGGCGTTGAT GCAGACAATA ACAAAAGAAA AGGCACTTGT AAGAATTAGG CTGGAAAACA GACGGGGGCA CTACGTGACT ATTGTCGATT TTGGCAATTC TGAAGACGCA AAGCAACTCG GCATTAAGGA CATGGCGCGT GAGTTGAAAA AGAAACTCGC CGCCGGCGGT ACTATTCGGG ACAGTTGGAT AGAGATACAA GGGGACCATA GGCAGAAGAT AAAGAAGTTA TTAATAGAAA TGGGGTTCAA GGAGGAGAAT ATCCTCATAG ATGAGGGAGT TACCGAGGCA TAG
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Protein sequence | MEIKLPGQDA EDIIDQLLGN TQEEALMQTI TKEKALVRIR LENRRGHYVT IVDFGNSEDA KQLGIKDMAR ELKKKLAAGG TIRDSWIEIQ GDHRQKIKKL LIEMGFKEEN ILIDEGVTEA
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