Gene Pars_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1752 
Symbol 
ID5055137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1572820 
End bp1573662 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content56% 
IMG OID640469295 
Product5'-methylthioadenosine phosphorylase II 
Protein accessionYP_001153955 
Protein GI145591953 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0005] Purine nucleoside phosphorylase 
TIGRFAM ID[TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000364775 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00290746 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGTAA AGCTGACACA ACCTCCCAAA AGTTCGAAGG ATATAGGCTT TGACGAGTTC 
CCCGCCATCG GCATAATTGG GGGGAGCGGG CTATACGACC CCGGCATATT TGAAAACGCT
GTTGAGATCC AAATACACAC CCCCTATGGC CTGCCCAGCG ACAACGTAAT CGTGGGGAGG
GTGTCGGGCC GCGTCGTGGC CTTCCTGCCG AGACACGGCA GAGGTCATAA ATACCCACCC
CACAAGATAC CCTACAGGGC CAACATTTAC GCCCTCCACG CCCTCGGCGT GAGGTCCATC
ATAGCCGTAA GCGCCGTGGG CTCTCTGAGG CCGGATTACG CCCCCGGCGA CTTCGTCGTG
CCTGACCAAT TCATAGACAT GACAAAGGGG AGGGAGTACA CCTTCTACGA CGGCCCCAGG
ACGTGCCACG TGCAGATAGG CCTCGAGCCC TTCACCCAGG AGATTCGGCA TGTGTTGCTG
GAAACGGCTA GGAAATACAA CAAGACCCAC GACGGGGGGT GCTACGTGTG TATAGAGGGA
CCGCGGTTCA GCACCAAGGC TGAGTCACGG ATATGGCGCG AGGTATATGG CTGTGATATT
ATCGGCATGA CCCTCGTCCC CGAGATCAAC CTAGCCCGCG AGCTCGGCAT GTGCTACGGC
ATGATAGCCT TGGTCACAGA CTACGACATA TGGGTACCAC ATCAGCCCGT CACGGCGGAG
GCCGTGGAGA GGATGATGAT AGAGAAGCTT GGTATTATAA AAAAAGTCAT AGCGGAGGCA
GTGCCTAAGA TACCCGCAGA GATTACTAAA TGCGCTGACG TATTGAAATA CGCCTGCGTC
TAA
 
Protein sequence
MAVKLTQPPK SSKDIGFDEF PAIGIIGGSG LYDPGIFENA VEIQIHTPYG LPSDNVIVGR 
VSGRVVAFLP RHGRGHKYPP HKIPYRANIY ALHALGVRSI IAVSAVGSLR PDYAPGDFVV
PDQFIDMTKG REYTFYDGPR TCHVQIGLEP FTQEIRHVLL ETARKYNKTH DGGCYVCIEG
PRFSTKAESR IWREVYGCDI IGMTLVPEIN LARELGMCYG MIALVTDYDI WVPHQPVTAE
AVERMMIEKL GIIKKVIAEA VPKIPAEITK CADVLKYACV