Gene Pars_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1748 
Symbol 
ID5055069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1571085 
End bp1571387 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content52% 
IMG OID640469291 
Product50S ribosomal protein L21e 
Protein accessionYP_001153951 
Protein GI145591949 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2139] Ribosomal protein L21E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00441406 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00234817 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCAAGA GAACCCATGG CTACCGCTAC AAATCACGAA AACTCCTGAG CAAAAAGCCA 
AGAGAAAGAG GCGTGCCGGG TCTTTCCAGG CTGTTGTACG AGTATAAGCC AGGCGACAAG
GTTGTGATTG ACGTCGACCC TACTTTCGTC TCCACAGCGC CCCACCGACG CTACCAGGGC
AAGGTAGGCG TAGTCATAGG GACGCGGGGA AGAGCGTATG TAATCGAGAC ATATATAGGT
GACAAGAAGA AGATTATAGT AACTACGCCA GAGCACTTGA AGCCGTTTCA GGGAGGGAGC
TGA
 
Protein sequence
MVKRTHGYRY KSRKLLSKKP RERGVPGLSR LLYEYKPGDK VVIDVDPTFV STAPHRRYQG 
KVGVVIGTRG RAYVIETYIG DKKKIIVTTP EHLKPFQGGS