Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1748 |
Symbol | |
ID | 5055069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1571085 |
End bp | 1571387 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640469291 |
Product | 50S ribosomal protein L21e |
Protein accession | YP_001153951 |
Protein GI | 145591949 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2139] Ribosomal protein L21E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00441406 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00234817 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTCAAGA GAACCCATGG CTACCGCTAC AAATCACGAA AACTCCTGAG CAAAAAGCCA AGAGAAAGAG GCGTGCCGGG TCTTTCCAGG CTGTTGTACG AGTATAAGCC AGGCGACAAG GTTGTGATTG ACGTCGACCC TACTTTCGTC TCCACAGCGC CCCACCGACG CTACCAGGGC AAGGTAGGCG TAGTCATAGG GACGCGGGGA AGAGCGTATG TAATCGAGAC ATATATAGGT GACAAGAAGA AGATTATAGT AACTACGCCA GAGCACTTGA AGCCGTTTCA GGGAGGGAGC TGA
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Protein sequence | MVKRTHGYRY KSRKLLSKKP RERGVPGLSR LLYEYKPGDK VVIDVDPTFV STAPHRRYQG KVGVVIGTRG RAYVIETYIG DKKKIIVTTP EHLKPFQGGS
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