| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1741 |
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| Symbol | |
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| ID | 5054970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1567403 |
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| End bp | 1567966 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640469284 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001153944 |
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| Protein GI | 145591942 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000285675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAACCTCG TCAGATCTTT TATCGCAGTA GACATCGACG CCCCAGACGT CGTGAAGAGA
ATCGAGGAGG TTCAACGCGA GGTGGTGAGA CTCGGCTTAG ACATAAAGCT CGTGGAAAGG
GAAAACCTGC ACATAACTCT CCGCTTCCTT GGGGAAATAC CCCAGCAGAG GGTTAACGAT
GTGATACGCG CGTTGTCCAC GGTGAAGTTC GCCAAGTTTG AGATGAGGCT TGCAGACCTC
GGTGTTTTCC CCGATTTGTC GAGGCCGCGG GTTTTGTGGG TAGGCGTATC CCAAGGCGCG
GAGGCGCTGG CCAACCTAGC GAATGCGGTT AGGGCGGCTG TGGATAAGTA TGCAGAACAC
GAGGAGGAGA GAGAATTCAC GCCGCATTTG ACCATCGGCC GGATTAAGAG TAGTAGAAAT
GTAGACCGGC TCGGGGATTT GATACGCCGC TACAAGGGAG TGGAGTTTGG CGTAGTAGTC
GTTGACAAGG TGAAGTTAAA AAGGTCGGTG CTTACGCCGA GGGGACCTAT TTATAGCGAC
CTATTTGTTG TTCCACTTAC GTGA
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| Protein sequence | MNLVRSFIAV DIDAPDVVKR IEEVQREVVR LGLDIKLVER ENLHITLRFL GEIPQQRVND
VIRALSTVKF AKFEMRLADL GVFPDLSRPR VLWVGVSQGA EALANLANAV RAAVDKYAEH
EEEREFTPHL TIGRIKSSRN VDRLGDLIRR YKGVEFGVVV VDKVKLKRSV LTPRGPIYSD
LFVVPLT
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