Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1734 |
Symbol | |
ID | 5054903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1561173 |
End bp | 1562018 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640469277 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001153937 |
Protein GI | 145591935 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.264913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000421461 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTATATA TATCTATTGT GCTGGTTCCG CAGCTTGGGC ACGCGACGCA TATATTTGGG ATTATAACGA AAGGCGTGGA AACCACAATA GCGGGCAACC CAACAGTGGA TATAATAATC TCAAAAGAGG GCGTGTATAG ACGACTCGGG GGCCCTATAT ACTACGCCTC TCTTGTCCTC GGCGCCTTAG GGGTAAAAGC AAAGGCTGTA GGCGTCGCAT CAGCGGAGGT AGTAAAAGAG ATCAGAAATC TACTCAGTAA ACTTAACATA GAGGCACAGC TTGAGGAGAC CGACGTGGCC ACCACATTTG AGCTCGACTA CACTACAAAG CCCAGATCAG TAAGGCTGGT TGCAAAACCT GCTAAGAAGA TTAGACATGT GTCTGGTGAT ATAGTAATTC TTTCTCCTGT ATACGACGAA CTAGCTGGCG TAGAAGTAGA GGCCGATAAA GTAGTCGTAG ATCTACAAGG CTTCATCCGG GCGAGGCTCC CGTTTCCCGA TGCCGATATT ATTCACCTAT CATACGATGA TATGCAGATC ACTCCAAGAG AGCTGGTGAG TATGGGAAAA AGATGGCCAA TAGTTGTCTA CACGCTTGGC GAAGATGGCG CCTTCCTCGT AAAGGGAGGT GAGGTGTATT ACATGAATAG CGCAAAGCTC AACGTTCTTG ACACGACAGG TAGCGGAGAC GTATTTCTGG CGGCGCTGAC TTACTTCTAC TTTTACAAGA AGCTAGATAT ACTAGAAGCC GTCTGTGAGG CTAGCAAGAT TGTAGCAGGA TTCTTATTGA CAAAAACCAT AACAAAGCAT GAGTTTAGCT GTATTAAACA AGTTGTTCAA GTGTAG
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Protein sequence | MLYISIVLVP QLGHATHIFG IITKGVETTI AGNPTVDIII SKEGVYRRLG GPIYYASLVL GALGVKAKAV GVASAEVVKE IRNLLSKLNI EAQLEETDVA TTFELDYTTK PRSVRLVAKP AKKIRHVSGD IVILSPVYDE LAGVEVEADK VVVDLQGFIR ARLPFPDADI IHLSYDDMQI TPRELVSMGK RWPIVVYTLG EDGAFLVKGG EVYYMNSAKL NVLDTTGSGD VFLAALTYFY FYKKLDILEA VCEASKIVAG FLLTKTITKH EFSCIKQVVQ V
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