| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1728 |
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| Symbol | |
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| ID | 5054770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1556090 |
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| End bp | 1557367 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640469271 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001153931 |
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| Protein GI | 145591929 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.254192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00045837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGGATTA AGCTACTAGG CGGCGCTGGT GAGGTCGGGA GACTTGCCGT GCTTATAAAA
ACCGCGTCTA GCGGCTTACT ACTAGACTAT GGAGTGTCTT TCGATGCACA AGACAGGCCC
GTTTTTCCGC TTCACGTACG CCCAAAAGAC CTCTCTGCGG TTTTCCTAAG CCATGCACAT
TTAGACCACA GCGGAGCTTT GCCTTTTCTA TACATCTCGA CAAGGACGCC GCTGTACTCC
ACACCTTTGA CCATGGAGCT CAGCGACTTG ATGTATACAG ACGCCATAAA GCTGTCTGGC
TACTACCTAC CCTATACACT TGAGGAGGTA AAGGAGACGA TGTCCAGTGC TATCCCGCTT
ACATACGGCG AACCTGTAGA TGTGGGCAAC GGCATATCGC TTACGGCATA TAACGCAGGG
CATATACCTG GCAGCGCCTT GGCTGTGATT GAGGTAGAGG GGAGGGTAGT TGTGTTCACT
GGCGATTTTA ACACCGTGGA TACGAATCTT TTGAGGGGCG CTGACGTTTA CAACTTACCT
AAAAACCCCG ACGTGGTGAT AATGGAGGCC ACCTACGCCT CGGCAAACCA CCCGCCGCGT
GACAAATTGG AGAAGGAATT CGTCCAGTCC GTGAAAGAGG TGCTCGAAGG GGGTGGGTCG
GTCTTAATAC CGTCGTTCGC CCTAGGACGG GCACAGGAGA TATTGTTAAC TCTGGTAAAA
CATGGGGTTG AATATCCTAT ATACGTCGAT GGGTTAGCCA GACAGATAAA CCAAATAGTG
GGGAGATATC CACACCTCCT CAAAGACCCC TCTCTCTACA AAAAAGCCCT AGATGTATCC
ATAGAAGTGC CCAACACATA CGTGCGGAAG GGCGCCGCGG AAGAGCCCTC CGTGATTATA
GCCCCAGCCG GCATGATAAA GGGCGGAGCG GCCCTCTTCT ACTTCAAGAA AATGGCTGGT
AATAGGAAAA ACGGCGTATT CCTACCCTCG TTCCAAGCGC CTAACACCCC GGGTTTCCAG
ATACTGAGCA AAGGATACGC CATCGTCGAC GGCGCTGTCA TAAAAGTCGA GGCAAGACTA
GAGTGGTTCG ACTTCAGCGC GCACGCCGGC AGGGGGGAGC TCGAAGCATT TATAAAACGC
TTTTCTCCAG AGACAAAAAT AATCCTAGTC CACACAGATC CAGCCACCGC GGCGCCGCTG
GTGAAAAAAC TTGCTGAAGA CGGCTACGAC AACATTTACC TCCCCACTAC GCCGGGAGAG
GAATTGGCGC TACAGTAG
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| Protein sequence | MRIKLLGGAG EVGRLAVLIK TASSGLLLDY GVSFDAQDRP VFPLHVRPKD LSAVFLSHAH
LDHSGALPFL YISTRTPLYS TPLTMELSDL MYTDAIKLSG YYLPYTLEEV KETMSSAIPL
TYGEPVDVGN GISLTAYNAG HIPGSALAVI EVEGRVVVFT GDFNTVDTNL LRGADVYNLP
KNPDVVIMEA TYASANHPPR DKLEKEFVQS VKEVLEGGGS VLIPSFALGR AQEILLTLVK
HGVEYPIYVD GLARQINQIV GRYPHLLKDP SLYKKALDVS IEVPNTYVRK GAAEEPSVII
APAGMIKGGA ALFYFKKMAG NRKNGVFLPS FQAPNTPGFQ ILSKGYAIVD GAVIKVEARL
EWFDFSAHAG RGELEAFIKR FSPETKIILV HTDPATAAPL VKKLAEDGYD NIYLPTTPGE
ELALQ
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