Gene Pars_1720 details

Gene Information

• Locus tag: Pars_1720
• Symbol: ribH
• ID: 5054689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum arsenaticum DSM 13514
• Kingdom: Archaea
• Replicon accession: NC_009376
• Strand: +
• Start bp: 1550266
• End bp: 1550718
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640469263
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_001153923
• Protein GI: 145591921
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.586437
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.0171526
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTAAGAA TAGCTGTGGT AGTCTCTGAG TTCAACTACG ACGTCACCCA GTTAATGTTG 
CAAAAAGCGT TGGAGCACGC TAAGTTCCTA GGCGCCGAGG TTACATATGT CGTAAAAGTA 
CCGGGCGTCT ACGACATTCC CACTTTGCTG AGAGATCTCG TGGCTAAGGA GGAGGTGGAT 
GCAGTAGTCA CACTCGGTGC GGTGATACAA GGTGCAACAA AACACGACGA GGTAGTGGCG 
CACCAAGCCG CCAGGAAGAT ACTAGACATC TCCGTAGAGT CGGGGAAACC CATCACGTTG 
GGCATAATCG GCCCAGGTGC TAATAGAATG CAGGCCTTAG AGAGGGTTGA GGAATATGCG 
AAACGTGCCG TCGAAGCTGC AGTGAAGTTG GCTAGGAGAA AAAAGACGCT GAGGGAAGCG 
AAGTACGCAG GCTCTACTGT ATTTATAGAT TAG 

 

Protein sequence

MVRIAVVVSE FNYDVTQLML QKALEHAKFL GAEVTYVVKV PGVYDIPTLL RDLVAKEEVD 
AVVTLGAVIQ GATKHDEVVA HQAARKILDI SVESGKPITL GIIGPGANRM QALERVEEYA 
KRAVEAAVKL ARRKKTLREA KYAGSTVFID