Gene Pars_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1717 
Symbol 
ID5054610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1548610 
End bp1549128 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content51% 
IMG OID640469260 
Productputative NTPase 
Protein accessionYP_001153920 
Protein GI145591918 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1618] Predicted nucleotide kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0465862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTGGC GTGAAAGGGC TGAGGTTAGA ATCGGCATCT CCGGCATGCC CGGCGTAGGC 
AAGACTACGC TAGTACTTAA AGTCGCCGAG CTGGCGGCTA AAAAGCTACG TGTCTGCGGA
TTTGTAACCC AGGAAGTCAG AGAGAGGGGG GTACGCATAG GTTTTGACGT AGTTGATATA
GCCAGTGGAA GACGGACACC ACTTGCTAGG GTGGGTACAG GGGAGCCCTC TGTGGGTAAG
TATGTCGTAT TTTTAGGCGC TTGTTCTACA ATAAGCGAGG CGCTACGTGG TACCTGCGAC
TTGTTGATTG TCGACGAGAT AGGCGCGATG GAGTTTAAAT GTCCGGGTTT TGGTTCAGAC
CTAGAAAGAG CTGTGTACAA CTCACCCAAG GTGTTGGCTG TGGTGCATAG GAACTACACA
AACTTGGCTG AGAGCCTTGG ATTTGAAATC TTGTGGCTCA CTAGAGATAA CTGGAGTACT
ATATACAACC AAGTCGTGCA CCGCCTAGGT CTTGCCTAG
 
Protein sequence
MMWRERAEVR IGISGMPGVG KTTLVLKVAE LAAKKLRVCG FVTQEVRERG VRIGFDVVDI 
ASGRRTPLAR VGTGEPSVGK YVVFLGACST ISEALRGTCD LLIVDEIGAM EFKCPGFGSD
LERAVYNSPK VLAVVHRNYT NLAESLGFEI LWLTRDNWST IYNQVVHRLG LA